BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13513 (UTR included)
(1462 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_974_C1 1881 0.0
>BF14_974_C1
Length = 980
Score = 1881 bits (949), Expect = 0.0
Identities = 972/980 (99%), Gaps = 6/980 (0%)
Strand = Plus / Plus
Query: 174 tcacaattaaaatagcaatctgagtttggagacattcattgtgaatagattttactacat 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcacaattaaaatagcaatctgagtttggagacattcattgtgaatagattttactacat 60
Query: 234 taataccacttagttatttatatatctgtctttcaaacgttctaaattatttgattaata 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taataccacttagttatttatatatctgtctttcaaacgttctaaattatttgattaata 120
Query: 294 agttattctcaagtgacaagttattgaaatcacagttaaagttacgaagtgaagtgctcg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agttattctcaagtgacaagttattgaaatcacagttaaagttacgaagtgaagtgctcg 180
Query: 354 caaaaagtgaaaaagatgtttttgtgacgtaatatcaaaaagtgttatttatcggataaa 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caaaaagtgaaaaagatgtttttgtgacgtaatatcaaaaagtgttatttatcggataaa 240
Query: 414 agaatggccgaaacgagtgaagccaaagctagcgcctccgctcccggcggagacgctggt 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agaatggccgaaacgagtgaagccaaagctagcgcctccgctcccggcggagacgctggt 300
Query: 474 ggagaagaggacaaacgagacgagaggatgttagaatgcaacatctgccttgatacagca 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggagaagaggacaaacgagacgagaggatgttagaatgcaacatctgccttgatacagca 360
Query: 534 cgagatgcagtcgtcagtatgtgtggacatctattctgttggccatgcttgcaccagtgg 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgagatgcagtcgtcagtatgtgtggacatctattctgttggccatgcttgcaccagtgg 420
Query: 594 ctggaaacgaggccaagtagacaagtttgtccagtatgcaaggcagctattagtagagag 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctggaaacgaggccaagtagacaagtttgtccagtatgcaaggcagctattagtagagag 480
Query: 654 aaggttattccactgtatggtcgaggcaacactaaacaagaggatcccagaaataaggtg 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaggttattccactgtatggtcgaggcaacactaaacaagaggatcccagaaataaggtg 540
Query: 714 cccccccggccggccggccagcgcacggagccggagaccagcagcggcttcccgggcttc 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cccccccggccggccggccagcgcacggagccggagaccagcagcggcttcccgggcttc 600
Query: 774 gggttcggcgaaggcttccacatgtccttcggcatcggcgtcttccccttcacctccaca 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gggttcggcgaaggcttccacatgtccttcggcatcggcgtcttccccttcacctccaca 660
Query: 834 ttcaacttcggggacccgaggcccagcgccgcgccgcgcggcacagctcagtacgaggag 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttcaacttcggggacccgaggcccagcgccgcgccgcgcggcacagctcagtacgaggag 720
Query: 894 gagcagttcctgtccaagatcttcctgtgggtggcgatcctgttcgtgctgtggctgata 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gagcagttcctgtccaagatcttcctgtgggtggcgatcctgttcgtgctgtggctgata 780
Query: 954 ttcgcgtgacctccgccgatcagcgcgcgccccgccccccgcaccctcacaccccgcaca 1013
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ttcgcgtgacctccgccgaccagcgcgcgccccgccccccgcaccctcacaccccgcaca 840
Query: 1014 cccctcctcttggaccgatcatccatagacggaccatccacgccggcgctgctggcggct 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 cccctcctcttggaccgatcatccatagacggaccatccacgccggcgctgctggcggct 900
Query: 1074 ctgcggtgacgtcatcacacacacagac------acacactcacacacccgtgtctcgtc 1127
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 901 ctgcggtgacgtcatcacacacacagacacacagacacactcacacacccgtgtctcgtc 960
Query: 1128 gcttcatagctatgtttccc 1147
|||| |||||||||||||||
Sbjct: 961 gcttgatagctatgtttccc 980
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 143,145
Number of extensions: 3036
Number of successful extensions: 3036
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3035
Number of HSP's successfully gapped: 2
Length of query: 1462
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1445
Effective length of database: 8,119,229
Effective search space: 11732285905
Effective search space used: 11732285905
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)