BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13514 (UTR included)
(3151 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2852_C1 1394 0.0
BF01062B2D09 726 0.0
>BF14_2852_C1
Length = 1359
Score = 1394 bits (703), Expect = 0.0
Identities = 787/814 (96%), Gaps = 2/814 (0%)
Strand = Plus / Plus
Query: 2340 ccaccgcaggcaccccggccggcccgcccgccgctagcgctccgccgaccgccccccgag 2399
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ccaccgcaggctccccggccggcccgcccgccgctagcgctccgccgaccgccccccgag 586
Query: 2400 ccctgcccgtggccgagaccgccaccgaggccgaggagggatacgacgactgatcgcact 2459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 ccctgcccgtggccgagaccgccaccgaggccgaggagggatacgacgactgatcgcact 646
Query: 2460 cgctccgagatattagcaataagtctacagtgtatgaagctatcctctcccatgtggatg 2519
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 647 cgctccgagatattagcaataagtctacagtgtatgaagctagcctctcccatgtggatg 706
Query: 2520 atgagttccatctcacagagtagtggctccagtagagtaatacctcctcatatagaacat 2579
|||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 707 atgagttccatcacacagagtagtggcaccagtagagtaatacctcctcatacagaacat 766
Query: 2580 ggcacgtcacctccacgcaccgtatctctgcgggcacctggtgtgactttgtttataatt 2639
|||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 767 ggcacgtcacctccacgctccgtatctctgcgggcacctggtgtgactttctttataatt 826
Query: 2640 aacgttaattaaatccttccatatcagatatatatttttctataaaattatcttacaact 2699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 aacgttaattaaatccttccatatcagatatatatttttctataaaattatcttacaact 886
Query: 2700 tgatctagttgtagcttgtgttatccgtcatggccgctagaggcctccagggaactcttc 2759
||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 887 tgatctagtagtagcttgtgttatctgtcatggccgctagaggcctccggggaactcttc 946
Query: 2760 ctcatatatatgagatgcaacactacatacatataaaataacacaactttctctgggcta 2819
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 947 ctcatatatatgagatgcaacgctacatacatataaaataacacaactttctctgggcta 1006
Query: 2820 caaacattgctaagagtagattgttgtgtaataagatccagtcaaagtttaaaacattaa 2879
|| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 cagatgttgctaagagtagattgttgtgtaataagatccagtcaaagtttaaaacattaa 1066
Query: 2880 catagctgaggctggtgtcggtgtgtcttttgctgtcacaagaacacatcagacgaacaa 2939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1067 catagctgaggctggtgtcggtgtgtcttttgctgtcacaagaacacatcagacgaacaa 1126
Query: 2940 cgtcatcaataaaatgatattcctgttattaattttctacggatagttgttacttcaccc 2999
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1127 cgtcatcaataaaatgatattcctgttattaattttctgcggatagttgttacttcaccc 1186
Query: 3000 aat-ttttcatcatcatcttaatcttaagcattaagtaatttttctagtcgc-ttttttt 3057
||| |||||||| ||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1187 aatcatttcatcaccatcttaatcttaagcattaagtaagttttctagtcgctttttttt 1246
Query: 3058 ttattaaatcttcgtccaaagtccatttaacttgattcaataatttgcatcgaacaaaat 3117
|||||||||||||||||||||||||||||| |||| | ||||||||||| |||||||
Sbjct: 1247 ttattaaatcttcgtccaaagtccatttaatttgannnnanaatttgcatcggacaaaat 1306
Query: 3118 gtatgtatatatattaaataaatagaaatgaatg 3151
||||||||||||||||||||||||||||||||||
Sbjct: 1307 gtatgtatatatattaaataaatagaaatgaatg 1340
Score = 914 bits (461), Expect = 0.0
Identities = 476/481 (98%)
Strand = Plus / Plus
Query: 1858 gtcgctcgagaaacgcgctgctgaacggggacacggagcactacgactgggagcagggct 1917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtcgctcgagaaacgcgctgctgaacggggacacggagcactacgactgggagcagggct 61
Query: 1918 acacgtgccaccagctgggctcgggcgccatcgtggtgcagctggcccagccctacatgc 1977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 acacgtgccaccagctgggctcgggcgccatcgtggtgcagctggcccagccctacatgc 121
Query: 1978 tctcctcgctgcgcatgttgctgtgggactgcgactaccgccactactcctactacgtgg 2037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tctcctcgctgcgcatgttgctgtgggactgcgactaccgccactactcctactacgtgg 181
Query: 2038 aggtgtccctcaactactggcactgggacatggtcgccgaccggaccagggacgcctgca 2097
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 182 aggtgtccctcaactactggcactgggacatggtcgccgaccggaccagagacgcctgca 241
Query: 2098 ggtcgtggcaggtgatctacttcacgcctcgcccggtgtctatcatacgtatcgtgggga 2157
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggtcgtggcaggtgatatacttcacgcctcgcccggtgtctatcatacgtatcgtgggga 301
Query: 2158 caaacaattccgtcaatgaggtgttccatctggtacatctggagtgtccgtcccaggtgg 2217
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 302 caaacaattccgtcaatgaggtgttccatctggtacacctggagtgtccgtcccaggtgg 361
Query: 2218 aggacgcccgggaggatcccgccgccaagaagacgcgacactctaaagacggacgagagg 2277
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aggacgcccgggaggaccccgccgccaagaagacgcgacactctaaagacggacgagagg 421
Query: 2278 ctcgcgcctcccgggacagggatggcaggcggagctccgacgacgcctcggcgagtaaca 2337
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 422 ctcgcgcctcccgggacagggatggcaggcggagctccgacgacgcgtcggcgagtaaca 481
Query: 2338 g 2338
|
Sbjct: 482 g 482
>BF01062B2D09
Length = 503
Score = 726 bits (366), Expect = 0.0
Identities = 375/378 (99%)
Strand = Plus / Plus
Query: 1059 gaagctcttcaaggcctcctcgagcgcgactcgttcttcgcccccgaggtagacatattc 1118
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 103 gaagctcttcaaggcctcctcgagcgagactcgttcttcgcccccgaggtagacatattc 162
Query: 1119 aaagcggtctgtaactggttcaatgctaaccaaccctttgttaaatctgacggcggaact 1178
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 163 aaagcggtctgtaactggttcaatgctaaccaaccgtttgttaaatctgacggcggaact 222
Query: 1179 tcacctgtggacaagatcctcaagtgtgtccgcctgactctgatgagtctggaggagttg 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 tcacctgtggacaagatcctcaagtgtgtccgcctgactctgatgagtctggaggagttg 282
Query: 1239 ctgggagttgtgcgacccttctccctggtgtccccggacatgttgctggacgccatacac 1298
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 283 ctgggagttgtgcgacccttctctctggtgtccccggacatgttgctggacgccatacac 342
Query: 1299 gataagaccaccaccaggaccacggacctgcgacatcgaggacttctggtgccggaagag 1358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gataagaccaccaccaggaccacggacctgcgacatcgaggacttctggtgccggaagag 402
Query: 1359 aacgtggcgacgccgaagcgcggcgcccgagtcatttccggcgacatgcgatccgcgctc 1418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 aacgtggcgacgccgaagcgcggcgcccgagtcatttccggcgacatgcgatccgcgctc 462
Query: 1419 ctggacggaaactccgac 1436
||||||||||||||||||
Sbjct: 463 ctggacggaaactccgac 480
Score = 69.9 bits (35), Expect = 2e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 1025 tcttcagcatgacaccttcttacagctgtccgtcg 1059
|||||||||||||||||||||||||||||||||||
Sbjct: 1 tcttcagcatgacaccttcttacagctgtccgtcg 35
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 355,211
Number of extensions: 7774
Number of successful extensions: 7774
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7772
Number of HSP's successfully gapped: 4
Length of query: 3151
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3133
Effective length of database: 8,109,745
Effective search space: 25407831085
Effective search space used: 25407831085
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)