BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13518 (UTR included)
(2170 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01017A2H09 1352 0.0
BF01062B1B12 724 0.0
>BF01017A2H09
Length = 686
Score = 1352 bits (682), Expect = 0.0
Identities = 685/686 (99%)
Strand = Plus / Plus
Query: 462 aatagtgaattatcctaaaagagaggtaaaacggacaatatggtcggtgatttaagggcc 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatagtgaattatcctaaaagagaggtaaaacggacaatatggtcggtgatttaagggcc 60
Query: 522 gtgccgttgtctgcgctctcatgtgaatctcgaaaccttttatcctctcgtttaaatgcc 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgccgttgtctgcgctctcatgtgaatctcgaaaccttttatcctctcgtttaaatgcc 120
Query: 582 aagaagattgtgccagtcgtcggacacgaccaaatatcgcgacacagggactggagaggt 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagaagattgtgccagtcgtcggacacgaccaaatatcgcgacacagggactggagaggt 180
Query: 642 ttagcgtcacttatcaatatatcgagcgaagccgcagctagtataagatgtaacgatcgc 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttagcgtcacttatcaatatatcgagcgaagccgcagctagtataagatgtaacgatcgc 240
Query: 702 gaggacaggacggacaaagttttaaacatatggataagcaggaacgatggcaccgctaca 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaggacaggacggacaaagttttaaacatatggataagcaggaacgatggcaccgctaca 300
Query: 762 ctcggtcgactcatggactttctccaaatacttgacagatttgatgtttctgatgatata 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctcggtcgactcatggactttctccaaatacttgacagatttgatgtttctgatgatata 360
Query: 822 ttggaattggccagggataataaacttataggaaatcacaatcagatagcatgtaatcct 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttggaattggccagggataataaacttataggaaatcacaatcagatagcatgtaatcct 420
Query: 882 gcgatagtcctggatggagcggacgatgacttcatcacgaatgatgacaggttgtatggc 941
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcgatagtcctggatggagcggatgatgacttcatcacgaatgatgacaggttgtatggc 480
Query: 942 gtcccgcagcggtatcatgcgtacgtgctgtttgctagggaagacagagacttcgttgat 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtcccgcagcggtatcatgcgtacgtgctgtttgctagggaagacagagacttcgttgat 540
Query: 1002 gaactactcagacggatgagacaggccggtttcaagctgtgcacagaagacgacctgata 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaactactcagacggatgagacaggccggtttcaagctgtgcacagaagacgacctgata 600
Query: 1062 gcgggtcacgcgacgccgttcgagccggtctcccgcctgatagccgagcgttgtcggaac 1121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gcgggtcacgcgacgccgttcgagccggtctcccgcctgatagccgagcgttgtcggaac 660
Query: 1122 atcgtcctggtgtactccccggactt 1147
||||||||||||||||||||||||||
Sbjct: 661 atcgtcctggtgtactccccggactt 686
>BF01062B1B12
Length = 588
Score = 724 bits (365), Expect = 0.0
Identities = 431/450 (95%), Gaps = 11/450 (2%)
Strand = Plus / Plus
Query: 1721 ttatttaccaaaaaaatttttatcacaataaatccctcggctttagaagcctggaaacca 1780
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 13 ttatttaccaaaaaaatttt-atcacagtaaatccctcggctttagaagcctggaaacca 71
Query: 1781 atattatataagtggctttaaaaccttttctatgaacgttgcacattgcgtacaatttga 1840
||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 72 atattatataagtggctttaaaaccttttctatgatggttgcacattgcgcacaatttga 131
Query: 1841 tcaactgacaagattcttgtattaagaatgtaggtgccgtgcagttgataaatgttcttt 1900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tcaactgacaagattcttgtattaagaatgtaggtgccgtgcagttgataaatgttcttt 191
Query: 1901 aaattaattatacattaatgttaattacacgatattattaagagatattacaaaaaaaaa 1960
||| |||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 192 aaactaatta-------atgttaattacacgatattattaagagatatta--aaaaaaaa 242
Query: 1961 caatttactgtgtcacataaatgaagcattatagattttaaaaaagaagcatgtttccga 2020
||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 243 caatttactgtgttacataaatgaagcattatacattttaaaaaagaagcatgtttccga 302
Query: 2021 acgagtgttaatcattaaggaatatatattttcttatggtaatactaaggtttaggttaa 2080
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 acgagtgttaatcattaag-aatatatattttcttatggtaatactaaggtttaggttaa 361
Query: 2081 gttcggtaagcaaagattaaaaaataattaccgcataaacgttacagattatatattctg 2140
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 362 gttcggtaagcaaagattaaaaaataattaccgtataaacgttacagattatatattctg 421
Query: 2141 tttatttttttttaatgagttaccattctg 2170
||||||||||||||||||||||||||||||
Sbjct: 422 tttatttttttttaatgagttaccattctg 451
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 308,621
Number of extensions: 7476
Number of successful extensions: 7476
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7473
Number of HSP's successfully gapped: 3
Length of query: 2170
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2153
Effective length of database: 8,119,229
Effective search space: 17480700037
Effective search space used: 17480700037
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)