BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13534 (UTR included)
(2161 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2E09 1398 0.0
BF14_2852_C1 135 3e-31
>BF01047B2E09
Length = 768
Score = 1398 bits (705), Expect = 0.0
Identities = 755/769 (98%), Gaps = 2/769 (0%)
Strand = Plus / Plus
Query: 371 atgttatcaaaccatataaaaacaggttactaagaattatacatgaagacttatataaat 430
||||||||| ||| |||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 1 atgttatcataccttataaaaaaaggttactaagaagtatacatgaagacttatataaat 60
Query: 431 acaagttaacggaatataaatgcaacacagttataattaaaagaaattaatacaattatt 490
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 61 acatgttaacggaatataaatgcaacacagtta-aattaaaagaaattaatacaattatt 119
Query: 491 atgcaaca-gaatggttttcttaacaagaacatgttacaaattaaaagaaatcaaactgc 549
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atgcaacaagaatggttttcttaacaagaacatgttacaaattaaaagaaatcaaactgc 179
Query: 550 cccgaaagtatcttcgtagtaagtttattgattcagttcgacttcatgtgaaaggtggta 609
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 180 cccgaaagtatcttcgtagtaagtttattgattcagtacgacttcatgtgaaaggtggta 239
Query: 610 ctggaggcacgggacttccaaagtacggtggactcggcggtcaaggaggttgcgtttatt 669
|||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 240 ctggaggcacgggacttccaaagtacggtggattcggcggtcaaggaggttgtgtttatt 299
Query: 670 gtcaaggaaaagaagatgcgaatcttcgaacaattatgtctcagtatcgagcgagaacta 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gtcaaggaaaagaagatgcgaatcttcgaacaattatgtctcagtatcgagcgagaacta 359
Query: 730 tttgcggaggtcacggcgaagacagtcggaaagcacaaatagtggggaaaccgggagaag 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 360 tttgcggaggtcacggcgaagacagtcggaaagcacaaatagtggggaaaccgggggaag 419
Query: 790 atatcaagttagaagttcctttaggtgtaacagtttatggagaaaacggtacagttctgg 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 atatcaagttagaagttcctttaggtgtaacagtttatggagaaaacggtacagttctgg 479
Query: 850 gttccattgataaagaagacgaaaccctcatagtggcacgcggtggtcccggagggaata 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gttccattgataaagaagacgaaaccctcatagtggcacgcggtggtcccggagggaata 539
Query: 910 aaaataataatttcttaggtcattttggtcaaaaccatcatattcgcctagacttaaaac 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 aaaataataatttcttaggtcattttggtcaaaaccatcatattcgcctagacttaaaac 599
Query: 970 taattgccgatattgggcttgtgggttttcctaatgctggtaagagttcacttttaaaag 1029
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 600 taatcgccgatattgggcttgtgggctttcctaatgctggtaagagttcacttttaaaag 659
Query: 1030 ctatatccagagccaagccgcgtatagcaaattaccccttcacgactattaaacccaaca 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ctatatccagagccaagccgcgtatagcaaattaccccttcacgactattaaacccaaca 719
Query: 1090 aagccattatacagtacagtgatctgagacaaatatccatagctgatct 1138
| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 aggccattatacagtacagtgatctgagacaaatatccatagctgatct 768
>BF14_2852_C1
Length = 1359
Score = 135 bits (68), Expect = 3e-31
Identities = 71/72 (98%)
Strand = Plus / Minus
Query: 2090 cgatgtaaaatcctcaaagcattcatttctatttatttaatatatatacatacattttgt 2149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1359 cgatgtaaaatcctcaaagcattcatttctatttatttaatatatatacatacattttgt 1300
Query: 2150 tcgatgcaaatt 2161
|||||||||||
Sbjct: 1299 ccgatgcaaatt 1288
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 336,025
Number of extensions: 21739
Number of successful extensions: 21739
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 21735
Number of HSP's successfully gapped: 2
Length of query: 2161
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2144
Effective length of database: 8,119,229
Effective search space: 17407626976
Effective search space used: 17407626976
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)