BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13538 (UTR included)
(9010 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2093_C1 2173 0.0
BF01042A2D04 1221 0.0
>BF14_2093_C1
Length = 1097
Score = 2173 bits (1096), Expect = 0.0
Identities = 1096/1096 (100%)
Strand = Plus / Plus
Query: 5304 gccttcctggaccgcagcaccgagacgcggaagatggcggcgcaaatcatcggcaacatg 5363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gccttcctggaccgcagcaccgagacgcggaagatggcggcgcaaatcatcggcaacatg 61
Query: 5364 tactccctgacggaccagaaggacctgacgccgtacctgccgagcatcatcccggggctt 5423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tactccctgacggaccagaaggacctgacgccgtacctgccgagcatcatcccggggctt 121
Query: 5424 aagagctcgctgctcgatcccgtgcccgaggtgcgctcggtgtccgcccgcgcgctgggg 5483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aagagctcgctgctcgatcccgtgcccgaggtgcgctcggtgtccgcccgcgcgctgggg 181
Query: 5484 gccatggtccgagggatgggcgagggtagcttcgaggagctcctgccttggctcatgcac 5543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gccatggtccgagggatgggcgagggtagcttcgaggagctcctgccttggctcatgcac 241
Query: 5544 accctcacttcagagtccagctccgtggatcgctcgggtgccgcccagggtctctccgag 5603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 accctcacttcagagtccagctccgtggatcgctcgggtgccgcccagggtctctccgag 301
Query: 5604 gtagtggccggcctcggaagtcacaagctgcacaagattatgcccgacatcatagcgacg 5663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gtagtggccggcctcggaagtcacaagctgcacaagattatgcccgacatcatagcgacg 361
Query: 5664 gcggagcgcacggacatcgccccgcacgtgaaggacggctacatcatgatgttcatctac 5723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gcggagcgcacggacatcgccccgcacgtgaaggacggctacatcatgatgttcatctac 421
Query: 5724 atgcccggagccttcacggacgagttcacgccctacatcggacagatcatcaaccccata 5783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 atgcccggagccttcacggacgagttcacgccctacatcggacagatcatcaaccccata 481
Query: 5784 ctgaaggcgctcgccgacgagaacgagtacgtccgggagacggcgctcaaggccggccag 5843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ctgaaggcgctcgccgacgagaacgagtacgtccgggagacggcgctcaaggccggccag 541
Query: 5844 aggatcgtcaacctgtacgccgagtccgccatcgcgctgctgctgccggagctggagaag 5903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aggatcgtcaacctgtacgccgagtccgccatcgcgctgctgctgccggagctggagaag 601
Query: 5904 ggtctgttcgatgacaactggcgcatccggtacagctccgtccagctgctgggtgacctg 5963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ggtctgttcgatgacaactggcgcatccggtacagctccgtccagctgctgggtgacctg 661
Query: 5964 ctgtatcgcatctccggggtgtccggcaagatgagcaccgagaccgcgtctgaagacgac 6023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ctgtatcgcatctccggggtgtccggcaagatgagcaccgagaccgcgtctgaagacgac 721
Query: 6024 aatttcggtaccgagcactcgcacaaggcaatcatcacggcgctcggcaccgaacgacgg 6083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 aatttcggtaccgagcactcgcacaaggcaatcatcacggcgctcggcaccgaacgacgg 781
Query: 6084 aaccgcgtgctggccggactctacatgggccgcagcgacgtggcgctcatggtgcgccag 6143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 aaccgcgtgctggccggactctacatgggccgcagcgacgtggcgctcatggtgcgccag 841
Query: 6144 gccgcgctgcacgtgtggaaggtggtcgtcaccaacacgcccaagacgctgagggagata 6203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 gccgcgctgcacgtgtggaaggtggtcgtcaccaacacgcccaagacgctgagggagata 901
Query: 6204 ctgcccacgctgttcaacctcctcctcggctgcctggcctccaccagctacgacaagcgg 6263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 ctgcccacgctgttcaacctcctcctcggctgcctggcctccaccagctacgacaagcgg 961
Query: 6264 caggtggctgccaggacgctcggtgacctcgtccggaagctcggtgagcgcgtgctgcca 6323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 caggtggctgccaggacgctcggtgacctcgtccggaagctcggtgagcgcgtgctgcca 1021
Query: 6324 gacatcgtgccgatattggagcgcggtctgcggtcggagcggccggaccagcgccaggga 6383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 gacatcgtgccgatattggagcgcggtctgcggtcggagcggccggaccagcgccaggga 1081
Query: 6384 gtctgcatcggcctcg 6399
||||||||||||||||
Sbjct: 1082 gtctgcatcggcctcg 1097
>BF01042A2D04
Length = 682
Score = 1221 bits (616), Expect = 0.0
Identities = 661/682 (96%)
Strand = Plus / Minus
Query: 7856 cgccgcgctgctgcatcacgtgctggccgccggcaaccccacgccctctgccctggccgc 7915
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 682 cgccgcgctgctgcatcacgtgctggccgccggcaaccccacgcnnnnngccctggccgc 623
Query: 7916 cgccgacgactggcctctggcccacggccgctcctgcgctctcttcgtggcgctcaagga 7975
||||||||||||| |||||||||||| |||||| ||||||||||||||||
Sbjct: 622 cgccgacgactggnnnnnggcccacggccgnnnntgcgctnnnntcgtggcgctcaagga 563
Query: 7976 gacgccagaccggatctaccgcgactacttccaggagaagatcgaccgagcgctgctcgc 8035
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 562 gacgccagaccggatctaccgcgaccacttccaggagaagatcgaccgagcgctgctcgc 503
Query: 8036 ctacctcgccagcgacaagatccccatcgtctgtaacggcattcgagggatcgggtacct 8095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ctacctcgccagcgacaagatccccatcgtctgtaacggcattcgagggatcgggtacct 443
Query: 8096 catccgacatctcctgtccagcgacacgcccgtcccgcccaatattctgtcacaattcgt 8155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 catccgacatctcctgtccagcgacacgcccgtcccgcccaatattctgtcacaattcgt 383
Query: 8156 caggagcatgaaccacagcagcaacgaggtgaagcagctgatggcgcgcgcctgcacgct 8215
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gaggagcatgaaccacagcagcaacgaggtgaagcagctgatggcgcgcgcctgcacgct 323
Query: 8216 ggtggggcgcgcgggctgtgccgacacgcgcggcccgggggcagacgtgctgcgggcgct 8275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ggtggggcgcgcgggctgtgccgacacgcgcggcccgggggcagacgtgctgcgggcgct 263
Query: 8276 cctgccggccctcgtcaacggcaccaaggagaagaactcgtacgtgcgcgccaacgccga 8335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cctgccggccctcgtcaacggcaccaaggagaagaactcgtacgtgcgcgccaacgccga 203
Query: 8336 gatcgcgctccgagccgtgctgcgcctcactcaggacgacagcttctaccagcaatgtct 8395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gatcgcgctccgagccgtgctgcgcctcactcaggacgacagcttctaccagcaatgtct 143
Query: 8396 gtcgctgctggaggagggcgggcgggaggcgctggcggacgtggtggcccgcgtgctgcg 8455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 gtcgctgctggaggagggcgggcgggaggcgctggcggacgtggtggcccgcgtgctgcg 83
Query: 8456 ccgcgccccagccgacggcagagacgaggacctggactgcaccctgatcacctgaggaga 8515
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 82 ccgcgccccagccgacggcagagacgaggacctggactgcaccctcatcacctgaggaga 23
Query: 8516 ggcgactgcaggagacacttat 8537
||||||||||||||||||||||
Sbjct: 22 ggcgactgcaggagacacttat 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 109,484
Number of extensions: 13737
Number of successful extensions: 13737
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 13736
Number of HSP's successfully gapped: 2
Length of query: 9010
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 8992
Effective length of database: 8,109,745
Effective search space: 72922827040
Effective search space used: 72922827040
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)