BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13540 (UTR included)
(2209 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01002X1E09 507 e-143
>BF01002X1E09
Length = 749
Score = 507 bits (256), Expect = e-143
Identities = 268/272 (98%)
Strand = Plus / Minus
Query: 1363 caatgttactagcaggtgatttgaatgctcatcatgtagcatttggatgtcgctccacta 1422
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 caatgttactggcaggtgatttgaatgctcatcatgtagcatttggatgtcgctccacta 682
Query: 1423 actcgagaggcaatgatgtatacaatttattagatgaatgtaacttatgtattcttaata 1482
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 681 actcgagaggcaatgatgtatataatttattagatgaatgtaacttatgtattcttaata 622
Query: 1483 caggggcttacactactgtagggaatatatcccataaccagtcagccatagacattgctt 1542
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 621 caggggcttacactactgtagggaatatatcccataaccagtcagatatagacattgctt 562
Query: 1543 gcgtcactccatctatagcccctttctgccattggagagtacatgacgacccaatgggca 1602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcgtcactccatctatagcccctttctgccattggagagtacatgacgacccaatgggca 502
Query: 1603 gctaccactatcccactatttgtgacatttac 1634
||||||||||||||||||||||||||||||||
Sbjct: 501 gctaccactatcccactatttgtgacatttac 470
Score = 147 bits (74), Expect = 9e-35
Identities = 74/74 (100%)
Strand = Plus / Minus
Query: 2104 cttttcagaaacatagtaaagatgacagttggataaattcatttttcgacaaatatgctc 2163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 cttttcagaaacatagtaaagatgacagttggataaattcatttttcgacaaatatgctc 352
Query: 2164 ctttaacaccacct 2177
||||||||||||||
Sbjct: 351 ctttaacaccacct 338
Score = 89.7 bits (45), Expect = 2e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 1835 catatctcaatacattaacaaaaaaccagttccatggtgggacaatgaatgcgcagatgc 1894
|||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 470 catatcccaatacattaataaaaaaccagttccatggtgggacaatgaatatgcagatgc 411
Query: 1895 t 1895
|
Sbjct: 410 t 410
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 310,158
Number of extensions: 6739
Number of successful extensions: 6739
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6739
Number of HSP's successfully gapped: 3
Length of query: 2209
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2192
Effective length of database: 8,119,229
Effective search space: 17797349968
Effective search space used: 17797349968
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)