BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13556 (UTR included)
(5917 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026A2B08 432 e-120
>BF01026A2B08
Length = 758
Score = 432 bits (218), Expect = e-120
Identities = 218/218 (100%)
Strand = Plus / Plus
Query: 439 tgatgtgctttagaagatagtatttggcatgataattggatcttcggcggcatccaggcg 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 tgatgtgctttagaagatagtatttggcatgataattggatcttcggcggcatccaggcg 213
Query: 499 tcatggcgaaggaaattgcggacgagtacgcatcaagcctggcggatttgactgtaaaca 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 tcatggcgaaggaaattgcggacgagtacgcatcaagcctggcggatttgactgtaaaca 273
Query: 559 gcaaaccccttattaatatgctgactatactcgcggaagagaacatcgagcatgcaggag 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gcaaaccccttattaatatgctgactatactcgcggaagagaacatcgagcatgcaggag 333
Query: 619 ttatcgttgagacagtggagaaacatttggagaaggtg 656
||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ttatcgttgagacagtggagaaacatttggagaaggtg 371
Score = 258 bits (130), Expect = 9e-68
Identities = 139/142 (97%)
Strand = Plus / Plus
Query: 214 ctacgtctggataaacttattatttgtgttgtattacactaatacgtgctctaatttaat 273
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 12 ctacgtctggataaacttattatttgtgttatattacactaatacgtgctctaatttaat 71
Query: 274 ttgttatgtgcatatcgatttgtacgtgagataatactacaaattaggtgataattgctc 333
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 72 ttgttatgtgcatatcgatttgtacgtgagataatactacaaattaggtgataactgctc 131
Query: 334 gcacgttggtacatacgataac 355
|||||||| |||||||||||||
Sbjct: 132 gcacgttgttacatacgataac 153
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 525,576
Number of extensions: 8794
Number of successful extensions: 8794
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8794
Number of HSP's successfully gapped: 2
Length of query: 5917
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5899
Effective length of database: 8,109,745
Effective search space: 47839385755
Effective search space used: 47839385755
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)