BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13574 (UTR included)
(1600 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2476_C1 153 1e-36
BF01056B1D02 121 4e-27
BF01037B1H08 113 9e-25
BF01023A2A12 113 9e-25
BF01033B1H01 78 5e-14
BF01010B2F09 76 2e-13
>BF14_2476_C1
Length = 1488
Score = 153 bits (77), Expect = 1e-36
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 1 cttttcctcaaacagaaacatgtttcacatagaatgagaaatataaataaaaaatatcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1377 cttttcctcaaacagaaacatgtttcacatagaatgagaaatataaataaaaaatatcta 1436
Query: 61 aataaaattgttgattagaaa 81
|||||||||||||||| ||||
Sbjct: 1437 aataaaattgttgattggaaa 1457
>BF01056B1D02
Length = 778
Score = 121 bits (61), Expect = 4e-27
Identities = 113/128 (88%), Gaps = 3/128 (2%)
Strand = Plus / Plus
Query: 1423 agtcgtggtggcctggaggttaaaagccgcctctcacgtgtgagggtgtgggtttgaaac 1482
|||||||||||||||||||||||| |||||| ||||||| |||| | ||||| |||||
Sbjct: 458 agtcgtggtggcctggaggttaaaggccgcccatcacgtg--agggcgcgggtt-gaaac 514
Query: 1483 ctggcaagaaacaatgtgatcttttccaagtcatgtgtactttctaagagtatttagaca 1542
|||||||| | |||||||||||||||| |||||| ||||||||||||| ||| |||||||
Sbjct: 515 ctggcaagtaccaatgtgatcttttccgagtcatatgtactttctaagggtagttagaca 574
Query: 1543 ctactgac 1550
| ||||||
Sbjct: 575 ccactgac 582
>BF01037B1H08
Length = 758
Score = 113 bits (57), Expect = 9e-25
Identities = 112/129 (86%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 1423 agtcgtggtggcctggaggttaaaagcc-gcctctcacgtgtgagggtgtgggtttgaaa 1481
|||||| ||||||||||||||||| ||| |||||||| |||| || | ||||| ||||
Sbjct: 70 agtcgttgtggcctggaggttaaaggcccgcctctcatacgtgaaggcgcgggttcgaaa 129
Query: 1482 cctggcaagaaacaatgtgatcttttccaagtcatgtgtactttctaagagtatttagac 1541
||||||||| | |||||||||||||||| |||||| |||||||||||||| ||||||| |
Sbjct: 130 cctggcaagtaccaatgtgatcttttccgagtcatatgtactttctaagaatatttagtc 189
Query: 1542 actactgac 1550
|| ||||||
Sbjct: 190 accactgac 198
>BF01023A2A12
Length = 723
Score = 113 bits (57), Expect = 9e-25
Identities = 112/128 (87%), Gaps = 3/128 (2%)
Strand = Plus / Plus
Query: 1423 agtcgtggtggcctggaggttaaaagccgcctctcacgtgtgagggtgtgggtttgaaac 1482
||||||||||||||| |||||||| |||||| ||||||| |||| | ||||| |||||
Sbjct: 53 agtcgtggtggcctgaaggttaaaggccgcccatcacgtg--agggcgcgggtt-gaaac 109
Query: 1483 ctggcaagaaacaatgtgatcttttccaagtcatgtgtactttctaagagtatttagaca 1542
|||||||| | |||||||||||||||| ||||| |||||||||||| ||||||||||||
Sbjct: 110 ctggcaagtaccaatgtgatcttttccgagtcacatgtactttctaacagtatttagaca 169
Query: 1543 ctactgac 1550
| ||||||
Sbjct: 170 ccactgac 177
>BF01033B1H01
Length = 601
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 1 cttttcctcaaacagaaacatgtttcacatagaatgagaaatataaataaaaaatatcta 60
|||||||| ||||||||||||||| |||| ||||||||||| |||||||||||| | ||
Sbjct: 129 cttttcctggaacagaaacatgttttacatggaatgagaaatttaaataaaaaattttta 70
Query: 61 aataaaa 67
|||||||
Sbjct: 69 aataaaa 63
>BF01010B2F09
Length = 764
Score = 75.8 bits (38), Expect = 2e-13
Identities = 102/122 (83%), Gaps = 1/122 (0%)
Strand = Plus / Minus
Query: 1430 gtggcctggaggttaaaagcc-gcctctcacgtgtgagggtgtgggtttgaaacctggca 1488
|||| |||||||||||| ||| ||||||||| |||| | | ||||| |||||||| ||
Sbjct: 544 gtgggctggaggttaaaggccagcctctcacacgtgaagtcgcgggttcgaaacctgaca 485
Query: 1489 agaaacaatgtgatcttttccaagtcatgtgtactttctaagagtatttagacactactg 1548
|| | |||||||||||| | |||||| |||||||||||||||||||||||| | ||||
Sbjct: 484 agtaccaatgtgatcttcatcgagtcatatgtactttctaagagtatttagacgccactg 425
Query: 1549 ac 1550
||
Sbjct: 424 ac 423
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 221,294
Number of extensions: 5461
Number of successful extensions: 5461
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 5457
Number of HSP's successfully gapped: 6
Length of query: 1600
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1583
Effective length of database: 8,119,229
Effective search space: 12852739507
Effective search space used: 12852739507
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)