BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13601 (UTR included)
(2113 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037B1H09 561 e-159
BF01056B1A09 543 e-154
>BF01037B1H09
Length = 738
Score = 561 bits (283), Expect = e-159
Identities = 298/303 (98%)
Strand = Plus / Plus
Query: 1010 ttctcaggtgcgacttggtgaatgggacttgttaaggaatacggactgctcgaagaatta 1069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ttctcaggtgcgacttggtgaatgggacttgttaaggaatacggactgctcgaagaatta 495
Query: 1070 ctgcagttctgatgcaatagacgtcgatgtagaagaaattgtggtccacgagaacttcat 1129
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ctgcagttctgatgcaatagacgtcgatgtagaagaaattgtggtccacgagaacttcac 555
Query: 1130 catcggagatccctcatttcaccatgatattgctcttctgagattagcccaagatgtaac 1189
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tatcggagatccctcatttcaccatgatattgctcttctgagattagcccaagatgtaac 615
Query: 1190 tttcagtgatttcatcaggccgatctgtcttcctattgatacggaaataagggaaaataa 1249
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 616 tttcagtgatttcatcaggccgatctgtcttcctatagatacggaaataagggaaaataa 675
Query: 1250 ttttgaacattcagttcatgcggaaatagcgggttggggtcaaaatgaatacagttcatt 1309
|||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 676 ttttgaacattcagtttatgcggaaatagcgggttggggtcaaaatgaatatagttcatt 735
Query: 1310 ttc 1312
|||
Sbjct: 736 ttc 738
>BF01056B1A09
Length = 770
Score = 543 bits (274), Expect = e-154
Identities = 290/294 (98%), Gaps = 1/294 (0%)
Strand = Plus / Minus
Query: 1820 tttaatagtaatctttattaagtgaatctaattttcatgacactttcccatacattttaa 1879
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tttaatagtaatctttattacgtgaatctaattttcatgacactttcccatacattttaa 691
Query: 1880 ttcacaactttcaacgccagcacctttctatcactcctatgtaataatttaaattgatag 1939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 ttcacaactttcaacgccagcacctttctatcactcctatgtaataatttaaattgatag 631
Query: 1940 ttcactaacgatctacaggaggaataaaatatcttggcacaatatatatttgtacttata 1999
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 630 ttcactaacgatctacaggaggaataaaatatcttggcacaa-atatatttgtacttata 572
Query: 2000 aaattgccatctttggagatatgagagatagtttgagattataatttagtatgagtaatg 2059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aaattgccatctttggagatatgagagatagtttgagattataatttagtatgagtaatg 512
Query: 2060 tttgtttattataaggtaggatatgaatggatttcctaatatgaaaaatgtata 2113
||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 511 tttgtttattataaggtaggatatgaatggagttcctaatataaaaaatgtata 458
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 264,407
Number of extensions: 5212
Number of successful extensions: 5212
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5211
Number of HSP's successfully gapped: 2
Length of query: 2113
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2096
Effective length of database: 8,119,229
Effective search space: 17017903984
Effective search space used: 17017903984
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)