BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13638 (UTR included)
(3193 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040B2F09 1505 0.0
>BF01040B2F09
Length = 775
Score = 1505 bits (759), Expect = 0.0
Identities = 771/775 (99%)
Strand = Plus / Plus
Query: 447 attttcttgtttgttgtttgcgtgaaagcaatagaggttttaataaatataaacatggct 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attttcttgtttgttgtttgcgtgaaagcaatagaggttttaataaatataaacatggct 60
Query: 507 aaaagaaaagcagccgtcaatgatataatattcgaattagacaacgatgacatagttata 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaagaaaagcagccgtcaatgatataatattcgaattagacaacgatgacatagttata 120
Query: 567 agcagcgatgaagaaagtaaggtatctaaaatgggacgttttgatggagaaaacagtcaa 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcagcgatgaagaaagtaaggtatctaaaatgggacgttttgatggagaaaacagtcaa 180
Query: 627 aacatcctaaagaagaagctgaataaagaagaaatagtttctgatgttattaatttagac 686
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacctcctaaagaagaagctgaataaagaagaaatagtttctgatgttattaatttagac 240
Query: 687 agtcctaatgaacctgaacgaaatattccatcaacaaagaaaactgagaatggagggaaa 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agtcctaatgaacctgaacgaaatattccatcaacaaagaaaactgagaatggagggaaa 300
Query: 747 aacaaaaccgaggtaacctccaaacaaaacaattcaaaacaaaatgacatatctcaaaat 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacaaaaccgaggtaacctccaaacaaaacaattcaaaacaaaatgacatatctcaaaat 360
Query: 807 aatgaagtgattgatattaccgaagaaaacaagaaaagctgtactagtaccattatattg 866
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aatgaagtgattgatattactgaagaaaacaagaaaagctgtactagtaccattatatta 420
Query: 867 aatgaagacatagtgattgattctccatcttcaaatatagaccttggtgttgtaggatgc 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aatgaagacatagtgattgattctccatcttcaaatatagaccttggtgttgtaggatgc 480
Query: 927 gagaacaaagctccattggtatcaatacgatttaatgacagtcttacggcacgtaattat 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gagaacaaagctccattggtatcaatacgatttaatgacagtcttacggcacgtaattat 540
Query: 987 aaaaaaataataaaggaatttattattaatcttttaaaatcaaaaaatactattgacact 1046
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 541 aaaaaaataataaaggaatttattgttaatcttttaaaatcaaaaaatactattgacact 600
Query: 1047 gactcagagactgataatgaccttgaaatatggccggaagacatagttgacgaagaattt 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gactcagagactgataatgaccttgaaatatggccggaagacatagttgacgaagaattt 660
Query: 1107 aattcaaaagaaaatcctgttgaggataatcttttcttcgttgataccacgccttgtaat 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aattcaaaagaaaatcctgttgaggataatcttttcttcgttgataccacgccttgtaat 720
Query: 1167 gaaggaaacaaagatatacctttatataaagctactaaaataatttccaatgaca 1221
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gaaggaaacaaagatatacctttatataaagctactaaaataatttccaatgaca 775
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 448,422
Number of extensions: 9067
Number of successful extensions: 9067
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9067
Number of HSP's successfully gapped: 1
Length of query: 3193
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3175
Effective length of database: 8,109,745
Effective search space: 25748440375
Effective search space used: 25748440375
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)