BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13639 (UTR included)
(1294 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1189_C1 1348 0.0
>BF14_1189_C1
Length = 869
Score = 1348 bits (680), Expect = 0.0
Identities = 690/692 (99%), Gaps = 1/692 (0%)
Strand = Plus / Plus
Query: 497 agaaatgggtgatgaaatggatccctgcgaatgcctgtggaatcatgagcttgctatgcg 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 agaaatgggtgatgaaatggatccctgcgaatgcctgtggaatcatgagcttgctatgcg 238
Query: 557 ccgactgatctccctgcttcgtcaggggcaatcatattgcactgatggggagtgcctgga 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ccgactgatctccctgcttcgtcaggggcaatcatattgcactgatggggagtgcctgga 298
Query: 617 cgagctgcccggacctccggcgcaggcggcgagcaacagcttcctagtgatgttcctcat 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 cgagctgcccggacctccggcgcaggcggcgagcaacagcttcctagtgatgttcctcat 358
Query: 677 gatggcactcgctatggccatgtacatgatgcgcccgcgtcagatacaagacgtcgccaa 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gatggcactcgctatggccatgtacatgatgcgcccgcgtcagatacaagacgtcgccaa 418
Query: 737 acccgcctccaactctcaggaccgtgacggcgccccgccgacgccgccacgtgtttaaat 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 acccgcctccaactctcaggaccgtgacggcgccccgccgacgccgccacgtgtttaaat 478
Query: 797 cttctagcagcattcttgtacggtcgggggggtatcttttaatgtattatagccgtaaag 856
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 479 cttctagcagcattcttgtacggtcgggggggtaacttttaatgtattatagccgtaaag 538
Query: 857 gcatagcgtcttaagacataataaaaccttaagcatagcgtgctaaggaacgtttaactt 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 gcatagcgtcttaagacataataaaaccttaagcatagcgtgctaaggaacgtttaactt 598
Query: 917 aaatgtaaccgtgtagtttgaaatttaaagttgaaaactttgtttatacattgttaatat 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 aaatgtaaccgtgtagtttgaaatttaaagttgaaaactttgtttatacattgttaatat 658
Query: 977 cccgcttgatgtaccacgaccttgacgtgtaactgacattgacagatagtgttaagtcat 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 cccgcttgatgtaccacgaccttgacgtgtaactgacattgacagatagtgttaagtcat 718
Query: 1037 tccatgctatttaatctattattgccaatatattacgttatgtaatttaaggattaatga 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 tccatgctatttaatctattattgccaatatattacgttatgtaatttaaggattaatga 778
Query: 1097 aagcattgtgtaattataacatttaaataattgatataatttttttttttttattaaata 1156
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 779 aagcattgtgtaattataacatttaaataattgatataa-ttttttttttttattaaata 837
Query: 1157 tatttcctttttatttacttggtgctatttat 1188
||||||||||||||||||||||||||||||||
Sbjct: 838 tatttcctttttatttacttggtgctatttat 869
Score = 357 bits (180), Expect = 3e-98
Identities = 180/180 (100%)
Strand = Plus / Plus
Query: 87 aaggacaatgaacaccaatcagggctctccaagcaaacagtgtaaaactaaaaatggcgg 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaggacaatgaacaccaatcagggctctccaagcaaacagtgtaaaactaaaaatggcgg 60
Query: 147 tgtaggtgtcgtccactaaaattttccctttgtctagttaaacgcgggtgcataacactt 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtaggtgtcgtccactaaaattttccctttgtctagttaaacgcgggtgcataacactt 120
Query: 207 aaagtgataaaaatattagcataccgtttacactaacgtattcaaagatcatccaaagag 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaagtgataaaaatattagcataccgtttacactaacgtattcaaagatcatccaaagag 180
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 257,987
Number of extensions: 35047
Number of successful extensions: 35047
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 35046
Number of HSP's successfully gapped: 2
Length of query: 1294
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1277
Effective length of database: 8,119,229
Effective search space: 10368255433
Effective search space used: 10368255433
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)