BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13655 (UTR included)
(2482 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023B2H07 1197 0.0
>BF01023B2H07
Length = 739
Score = 1197 bits (604), Expect = 0.0
Identities = 672/693 (96%), Gaps = 2/693 (0%)
Strand = Plus / Plus
Query: 1686 tccctacatcaagatgcctccagcgatcccaacgggcccggatacaacaactatctgacc 1745
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 49 tccctacatcaagatgcctccagcgatcccaacgggcccggatacaataactatctgacc 108
Query: 1746 gtacatagcttcccatcagcgctgaacttgccaacgataacgacacagagctatgacgat 1805
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 109 gtacatagcttcccatcagcgttgaacttgccaacgataacgacacagagctatgacgat 168
Query: 1806 ctaactgggggtaggggccgccccggcagcgaggggtccgacgagcccaaacacacttgg 1865
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 169 ctaactgggggtaggggccgccccggcagcgaggggtccgacgagcctaaacacacttgg 228
Query: 1866 acacagatgaccccgcaggagatagccacgtggatagacaagcgatcacgggtcttattc 1925
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 229 acacagatgaccccgcaggaaatagccacgtggatagacaagcgatcacgggtcttattc 288
Query: 1926 ccgttactctttatcctattcaatataatttactggaccttcgtctattgtctatgattc 1985
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 289 ccgttactctttatcctattcaacatcatttactggaccttcgtctattgtctatgattc 348
Query: 1986 gtctattatctcgtgcactatgtgcaggatattaagaatgttcctttacgaatatttaat 2045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gtctattatctcgtgcactatgtgcaggatattaagaatgttcctttacgaatatttaat 408
Query: 2046 cagaaacatcgagcttattaggttttctaaaatgcaacccgcaattttatacaatctatt 2105
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 409 cagaaccatcgagcttattaggttttctaaaatgcaacccgcaattttatacaatctagt 468
Query: 2106 gattcactgtcgacaagaaaaactttaatagatgacatatattgacagtttttttttaaa 2165
||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||| |||
Sbjct: 469 gattcactgtcgacaagaagaac-ttaatagatgacatatattgacagttatttttgaaa 527
Query: 2166 cactaagtgacagaaagaaataaatctgtcacgtgtttaaatacgttaggttaaaattga 2225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 cactaagtgacagaaagaaataaatctgtcacgtgtttaaatacgttaggttaaaattga 587
Query: 2226 ttgttaaaaaaaaaatctgtctataaataagctccgtcgagtgtggtatagtcatgttat 2285
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 ttgtt-aaaaaaaactctgtctataaataagctccgtcgagtgtggtatagtcatgttat 646
Query: 2286 tgaaaattattatttatatatttaattaatgcaagtaaattaaaaacaacatattaatat 2345
|||||||||||||||||||||||||| |||||||||||||| ||| |||| || |||||
Sbjct: 647 tgaaaattattatttatatatttaataaatgcaagtaaattnnaaataacacataaatat 706
Query: 2346 ataagaaaaaatatgttaatgttaagaaaacta 2378
|||||| ||||||||||||||||||||||||||
Sbjct: 707 ataaganaaaatatgttaatgttaagaaaacta 739
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 313,505
Number of extensions: 8062
Number of successful extensions: 8062
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8060
Number of HSP's successfully gapped: 1
Length of query: 2482
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2465
Effective length of database: 8,119,229
Effective search space: 20013899485
Effective search space used: 20013899485
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)