BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13656 (UTR included)
(1882 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2640_C1 737 0.0
>BF14_2640_C1
Length = 927
Score = 737 bits (372), Expect = 0.0
Identities = 387/392 (98%)
Strand = Plus / Plus
Query: 1491 gtgtttcattagaatggctttcaaaaagaatttttagattgtttgatgttgatgtttaac 1550
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgtttcattagaatggctttcaaatagaatttttagattgtttgatgttgatgtttaac 60
Query: 1551 attgcatttagattttcattatatgttaatatttattgttgtgataaattatttggttac 1610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attgcatttagattttcattatatgttaatatttattgttgtgataaattatttggttac 120
Query: 1611 acttaatattgcttcatattattaagagagattttttttttttatgttttaagttatcaa 1670
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acttaatactgcttcatattattaagagagattttttttttttatgttttaagttatcaa 180
Query: 1671 tgtgattccatataatggaatggatatgttacctctgtacgagaaaagtttactttttga 1730
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 181 tgtgattccatataatggaatggatatgttacctctgtacaagaaaagtttactttttga 240
Query: 1731 aatcttctattttagtttatcatactgtgtgttactttaaaaatattttattgcacatgt 1790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatcttctattttagtttatcatactgtgtgttactttaaaaatattttattgcacatgt 300
Query: 1791 gatgttattacagtgtgtaatagcaaggactacatttttgtttgtctttatttcttaacg 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatgttattacagtgtgtaatagcaaggactacatttttgtttgtctttatttcttaacg 360
Query: 1851 cgtggtctatcgtatagacgaagtaaatgttt 1882
||||||||||||||||||||||||||||||
Sbjct: 361 tatggtctatcgtatagacgaagtaaatgttt 392
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 266,451
Number of extensions: 18036
Number of successful extensions: 18036
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 18036
Number of HSP's successfully gapped: 1
Length of query: 1882
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1865
Effective length of database: 8,119,229
Effective search space: 15142362085
Effective search space used: 15142362085
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)