BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13671 (UTR included)
(2632 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1140_C1 2446 0.0
BF01055B2D01 630 e-180
BF14_431_C1 216 1e-55
>BF14_1140_C1
Length = 1649
Score = 2446 bits (1234), Expect = 0.0
Identities = 1267/1278 (99%)
Strand = Plus / Plus
Query: 561 acggaattcgaaggcaacgaagcggaagtgtcggttaagaaagaagatgaagttgttgca 620
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 2 acggaattcgaaggcaacgaagcggaagtgtcggttaagaaagaagatgaaggtgttgca 61
Query: 621 aatgacgaagacaaggtaaagacggagaccgaagacaaagaagacgccgagcacgagctc 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aatgacgaagacaaggtaaagacggagaccgaagacaaagaagacgccgagcacgagctc 121
Query: 681 aaggacggccaagaagtccccgaggaccccagcagaccggccgacgacgagctccttagt 740
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 122 aaggacggccacgaagtccccgaggaccccagcagaccggccgacgacgagctccttaat 181
Query: 741 gttatcaaatacttaatagcagctggctgtgacgtcaacaaacagggtccggagggcatg 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gttatcaaatacttaatagcagctggctgtgacgtcaacaaacagggtccggagggcatg 241
Query: 801 tcgggcctgcacatgtcgtgtcagtacggcggcgcggccgtgtgccttatgttactggag 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tcgggcctgcacatgtcgtgtcagtacggcggcgcggccgtgtgccttatgttactggag 301
Query: 861 gcaggcgctgcggtcgacgccagggaccacggcgggtggacgccgctcgtgcgcgccgcc 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gcaggcgctgcggtcgacgccagggaccacggcgggtggacgccgctcgtgcgcgccgcc 361
Query: 921 gagaacaaacacgccgccgtcgtcaggttactgctggcagccggggcggacgccgcgtct 980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gagaacaaacacgccgccgtcgtcaggttactgctggcagccggggcggacgccgcgtct 421
Query: 981 tgtgacaacgaaggcaaccagcccatacactggtgtacactggcgggcgactcgcgctgc 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgtgacaacgaaggcaaccagcccatacactggtgtacactggcgggcgactcgcgctgc 481
Query: 1041 ctcgccatgatactgagggccgcgccgcacgccaccaacgctcctaacgctcacactgac 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ctcgccatgatactgagggccgcgccgcacgccaccaacgctcctaacgctcacactgac 541
Query: 1101 acaccgcttcacatcgccgctcgcgagggtcactactcgagtgtggtcgtgctgctcgcc 1160
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 542 acaccgcttcacatcgccgctcgcgagggtcactactcgtgtgtggtcgtgctgctcgcc 601
Query: 1161 cacggagccaggacggatatagagaactcgtccggagaacttccggtggaggtgtgcagc 1220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 cacggagccaggacggatatagagaactcgtccggagaacttccggtggaggtgtgcagc 661
Query: 1221 ggtccgtgccacgaggccatctctatgaacatgcaaatgacactcgccgtcaaagacact 1280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ggtccgtgccacgaggccatctctatgaacatgcaaatgacactcgccgtcaaagacact 721
Query: 1281 atgacacgggtgaaggtcattacgagtgacctgtccaacggccgcgagccgtaccccgtg 1340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 atgacacgggtgaaggtcattacgagtgacctgtccaacggccgcgagccgtaccccgtg 781
Query: 1341 agtgtggtcaacgaggtggacgacgcctcgcccgccgccttcacgtacgtgtcacagcat 1400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 agtgtggtcaacgaggtggacgacgcctcgcccgccgccttcacgtacgtgtcacagcat 841
Query: 1401 gtgctcactgaacacctcaccatagacaacaccatagagaccatgcagggctgcgagtgt 1460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 gtgctcactgaacacctcaccatagacaacaccatagagaccatgcagggctgcgagtgt 901
Query: 1461 gcgggtgggtcgtgcgacggcgagtgcggctgctgcgtgctgtccgtgcggcgttggtac 1520
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 902 gcgggtgggtcgtgcgacggcgagtgcggctgctgcgtgctgtccgtgcggcgctggtac 961
Query: 1521 cgcgccggccgcctgccgcccgccttcccccaccacgacccgcccgtcatgttcgagtgt 1580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 cgcgccggccgcctgccgcccgccttcccccaccacgacccgcccgtcatgttcgagtgt 1021
Query: 1581 aactacacgtgcggctgtaacatgaaacggtgcacaaaccgcgtggtgggtcggatggag 1640
||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 1022 aaccacacgtgcggctgtaacatgaaacggtgcacgaaccgcgtcgtgggtcggatggag 1081
Query: 1641 agcgcggggtcgctgaacaccccggtgcaggtgttcaggaccaggacgcgcggctgggga 1700
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1082 agcgcggggtcgctgaacaccccggtgcaggtgttcagaaccaggacgcgcggctgggga 1141
Query: 1701 ctgagggtgctgaccagggtgagccggggggagctgctggccctgtaccggggggaactc 1760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 ctgagggtgctgaccagggtgagccggggggagctgctggccctgtaccggggggaactc 1201
Query: 1761 gtcaccagcgagcgagccgacgcgcggaccgacgatcagtacatgttcgccttggacctg 1820
|| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1202 gttaccagcgagcgagccgacgcgcggaccgactatcagtacatgttcgccttggacctg 1261
Query: 1821 aagcccgacctactggag 1838
||||||||||||||||||
Sbjct: 1262 aagcccgacctactggag 1279
>BF01055B2D01
Length = 393
Score = 630 bits (318), Expect = e-180
Identities = 349/359 (97%), Gaps = 1/359 (0%)
Strand = Plus / Plus
Query: 1880 cttcggtagcgcggctcggttcatgaaccacagctgccggccgtccgcggcgcccgtgag 1939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 cttcggtagcgcggctcggttcatgaaccacagctgccggccgtccgcggcgcccgtgag 68
Query: 1940 ggtgttcacctcgggccgcgatctgcgcctgccgcacgtcgccttcttcgctctcagaga 1999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 ggtgttcacctcgggccgcgatctgcgcctgccgcacgtcgccttcttcgctctcagaga 128
Query: 2000 cctcgcgcccggcgacgagctcactttcgactacggagacaaattttggtcagtgaagtc 2059
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 129 cctcgcgcccggcgacgagctctctttcgactacggagacaaattttggtcagtgaagtc 188
Query: 2060 gaaatggatgaaatgcgagtgcgagtcgcccgactgcagatacccgaccaagatggagga 2119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gaaatggatgaaatgcgagtgcgagtcgcccgactgcagatacccgaccaagatggagga 248
Query: 2120 ggctgatacatagcaatactcaatgttaatatgttattaaggagacgttgtactatatag 2179
|||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||
Sbjct: 249 ggctgatacatagcaatactcactgtgaatatgttattaaggagacattgtactatatag 308
Query: 2180 aa-tataacctacgacagatgtaacttaacagtaatgactactcattaaacgtttagaa 2237
|| |||| |||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 309 aagtatannntacgacagatgtgacttaacagtgatgactactcattaaacgtttagaa 367
>BF14_431_C1
Length = 1461
Score = 216 bits (109), Expect = 1e-55
Identities = 193/221 (87%)
Strand = Plus / Plus
Query: 43 attttgcacaatatttttattgtgcaataatactgaatattttttttgtatccaaacgtt 102
|||||||||| ||||||||||||||||||||| |||||| | | |||| |||||||||||
Sbjct: 808 attttgcacagtatttttattgtgcaataatattgaatactctctttgaatccaaacgtt 867
Query: 103 cagtaatatttagcaataagattggcaaaccattcacgggactgaactgatcacaaccgc 162
||||||| |||| | ||||||||| ||||||||||||| |||||||| ||||| |||||
Sbjct: 868 cagtaatgtttaccgataagattgtcaaaccattcacgtgactgaacccatcacgaccgc 927
Query: 163 tcaaaacagtgaactgaaaaaatatagcgcagcaccaaccctacacagtacaaaacatac 222
|||||||||||||||||||| |||| ||||| |||||| ||||||||||||| | ||||
Sbjct: 928 tcaaaacagtgaactgaaaagatattgcgcaataccaactctacacagtacaagaaatac 987
Query: 223 atattgcgcaataaaattgaagctcactcaaacttctgttc 263
|||||| ||||||| || ||||| ||| |||||||||||
Sbjct: 988 ttattgcccaataaagttcgagctcgctcgaacttctgttc 1028
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 250,170
Number of extensions: 4749
Number of successful extensions: 4749
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4747
Number of HSP's successfully gapped: 3
Length of query: 2632
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2615
Effective length of database: 8,119,229
Effective search space: 21231783835
Effective search space used: 21231783835
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)