BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13692 (UTR included)
(2263 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2257_C1 1035 0.0
BF01032A1F03 1021 0.0
>BF14_2257_C1
Length = 812
Score = 1035 bits (522), Expect = 0.0
Identities = 530/533 (99%)
Strand = Plus / Plus
Query: 567 gttatggcaaacttgaatttccaacaagctcctagaagcctagcaagtggcggggtcggt 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gttatggcaaacttgaatttccaacaagctcctagaagcctagcaagtggcggggtcggt 339
Query: 627 ggacgggttggttcaggtttggttggcggagtatcaggacatgtgacaccgacatttggt 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ggacgggttggttcaggtttggttggcggagtatcaggacatgtgacaccgacatttggt 399
Query: 687 ggcgccctgtcaccaggacggggctccactgcgatgccagggggcgcaccaccctcaatg 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ggcgccctgtcaccaggacggggctccactgcgatgccagggggcgcaccaccctcaatg 459
Query: 747 gcatctagatctacattatttggacagcgagcatttgctgaccgtagagtacctataccg 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gcatctagatctacattatttggacagcgagcatttgctgaccgtagagtacctataccg 519
Query: 807 acaccactatcacaagctaactcaaattctatgtcaagtatggcgaatctctcccgtttt 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 acaccactatcacaagctaactcaaattctatgtcaagtatggcgaatctctcccgtttt 579
Query: 867 aatgcgaactatcattccgtgttcggcgagggcggtgacacttcaacaccgccactgctt 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 aatgcgaactatcattccgtgttcggcgagggcggtgacacttcaacaccgccactgctt 639
Query: 927 gacctcagcgagtttccatcactaacggcccggggtgccggcgaccaagcgcccgcggct 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 gacctcagcgagtttccatcactaacggcccggggtgccggcgaccaagcgcccgcggct 699
Query: 987 gcgcccccaccacccggctcaaagccctacgttggtatggtcaaacagccaacgtcggag 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 gcgcccccaccacccggctcaaagccctacgttggtatggtcaaacagccaacgtcggag 759
Query: 1047 cagtctgaattcactatgtcttcagaagacttccctgccttacccggcacatc 1099
||||||||||||||||||||||| || |||||||| |||||||||||||||||
Sbjct: 760 cagtctgaattcactatgtcttcggangacttccccgccttacccggcacatc 812
Score = 109 bits (55), Expect = 2e-23
Identities = 55/55 (100%)
Strand = Plus / Plus
Query: 515 aaatccgagtgaaattattataatttattttagcttcttaaagatgtataaagtt 569
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aaatccgagtgaaattattataatttattttagcttcttaaagatgtataaagtt 56
>BF01032A1F03
Length = 644
Score = 1021 bits (515), Expect = 0.0
Identities = 527/531 (99%)
Strand = Plus / Plus
Query: 567 gttatggcaaacttgaatttccaacaagctcctagaagcctagcaagtggcggggtcggt 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 gttatggcaaacttgaatttccaacaagctcctagaagcctagcaagtggcggggtcggt 173
Query: 627 ggacgggttggttcaggtttggttggcggagtatcaggacatgtgacaccgacatttggt 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 ggacgggttggttcaggtttggttggcggagtatcaggacatgtgacaccgacatttggt 233
Query: 687 ggcgccctgtcaccaggacggggctccactgcgatgccagggggcgcaccaccctcaatg 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 ggcgccctgtcaccaggacggggctccactgcgatgccagggggcgcaccaccctcaatg 293
Query: 747 gcatctagatctacattatttggacagcgagcatttgctgaccgtagagtacctataccg 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gcatctagatctacattatttggacagcgagcatttgctgaccgtagagtacctataccg 353
Query: 807 acaccactatcacaagctaactcaaattctatgtcaagtatggcgaatctctcccgtttt 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 acaccactatcacaagctaactcaaattctatgtcaagtatggcgaatctctcccgtttt 413
Query: 867 aatgcgaactatcattccgtgttcggcgagggcggtgacacttcaacaccgccactgctt 926
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 414 aatgcgaactatcattccgtgttcggcgagggcggtgacacttcaacacctccgctgctt 473
Query: 927 gacctcagcgagtttccatcactaacggcccggggtgccggcgaccaagcgcccgcggct 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gacctcagcgagtttccatcactaacggcccggggtgccggcgaccaagcgcccgcggct 533
Query: 987 gcgcccccaccacccggctcaaagccctacgttggtatggtcaaacagccaacgtcggag 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gcgcccccaccacccggctcaaagccctacgttggtatggtcaaacagccaacgtcggag 593
Query: 1047 cagtctgaattcactatgtcttcagaagacttccctgccttacccggcaca 1097
||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 594 cagtctgaattcactatgtcttcggaagacttccccgccttacccggcaca 644
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 256,921
Number of extensions: 4883
Number of successful extensions: 4883
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4883
Number of HSP's successfully gapped: 3
Length of query: 2263
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2246
Effective length of database: 8,119,229
Effective search space: 18235788334
Effective search space used: 18235788334
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)