BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13699 (UTR included)
(3748 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01013A2A12 1263 0.0
>BF01013A2A12
Length = 733
Score = 1263 bits (637), Expect = 0.0
Identities = 643/645 (99%)
Strand = Plus / Plus
Query: 2600 tatgcagatgactttagatggcaatcaggcaggaatgcaaatgccagcctctgatcccat 2659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatgcagatgactttagatggcaatcaggcaggaatgcaaatgccagcctctgatcccat 60
Query: 2660 ttacatgcaaccacccaatgttgggcaacagatgccagcacatatgacccaaccgcaaac 2719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttacatgcaaccacccaatgttgggcaacagatgccagcacatatgacccaaccgcaaac 120
Query: 2720 catgttgcagcaacaggtgagtggccaacatacaacacagatgggtggtgtgcaatatgt 2779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catgttgcagcaacaggtgagtggccaacatacaacacagatgggtggtgtgcaatatgt 180
Query: 2780 tcctaatcagacagtgcctcaagtgtctatggcacatcagaacattccgatgtctatgca 2839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcctaatcagacagtgcctcaagtgtctatggcacatcagaacattccgatgtctatgca 240
Query: 2840 gcaaagcatgccgatgggaatgggcggaggagttcatgctagtgtagtgcaatctcagac 2899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcaaagcatgccgatgggaatgggcggaggagttcatgctagtgtagtgcaatctcagac 300
Query: 2900 gagcatgggtctgggttatgggggtgtggtacccgtgatgtcacagactagcgtggcgcc 2959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagcatgggtctgggttatgggggtgtggtacccgtgatgtcacagactagcgtggcgcc 360
Query: 2960 agtcgaggcgaccgtgtcggggactaactcgccaatagtgtcaatgccagtaaattccac 3019
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 361 agtcgaggcgaccgtgtcggggactaactcgccaatagtgtcgatgccagtaaattccac 420
Query: 3020 cgcgtacgtgtctaatgctccacagccgggacatgacagtcagggtttcggcagcccagt 3079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgcgtacgtgtctaatgctccacagccgggacatgacagtcagggtttcggcagcccagt 480
Query: 3080 gagtgcggtggtgtctcacgccattagtggctcggtggtgagcaatgtgaatgtgaatgc 3139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gagtgcggtggtgtctcacgccattagtggctcggtggtgagcaatgtgaatgtgaatgc 540
Query: 3140 gtgtgatagcagtgcaccagaatcggtaccagacggaatgcaggctggcgacactggcga 3199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtgtgatagcagtgcaccagaatcggtaccagacggaatgcaggctggcgacactggcga 600
Query: 3200 tggtaaagaggagccgcaaccagctgtgcaaccagacgatgaaag 3244
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 601 tggtaaagaggagccgcaaccagctgtgcaaccggacgatgaaag 645
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 375,280
Number of extensions: 7001
Number of successful extensions: 7001
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7001
Number of HSP's successfully gapped: 1
Length of query: 3748
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3730
Effective length of database: 8,109,745
Effective search space: 30249348850
Effective search space used: 30249348850
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)