BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13705 (UTR included)
(2890 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01014A1E11 829 0.0
>BF01014A1E11
Length = 757
Score = 829 bits (418), Expect = 0.0
Identities = 469/482 (97%), Gaps = 3/482 (0%)
Strand = Plus / Plus
Query: 2411 atatgatagaggaaataaattgttatataatatatggtgcgtaagtgaattatttattac 2470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atatgatagaggaaataaattgttatataatatatggtgcgtaagtgaattatttattac 60
Query: 2471 aaatgctaagaagtctatcgccatattagctatgcgctatggaccgaaataacctcttgc 2530
||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 aaatgctaagaagtctatctccatat-agctatgcgctatggaccgaaataacctcttgc 119
Query: 2531 cttaattttttctcaaatcatttacattccgtt-ccattctataacttataaacgattag 2589
||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 120 ctttatcttttctcaaatcatttacattccgtttccattctataacttataaacgattag 179
Query: 2590 attttgttttatacggacgtgtattaacaatgttctgtttgtttcgtgactcgacatctt 2649
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 180 attttgttttatacggacgtgtattaacaatgttctgtttgtttcgtgactcgacagctt 239
Query: 2650 cattaaaacgacagatgtttatgttttacaatgcgttgtattatttcgttttgtttcata 2709
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 240 cattaaaacgacagatgtttatgttttacaatgcgttgtattatttcgttttgcttcata 299
Query: 2710 ctcggcgacgtctcgtctgtttgtgaagccgtaggccttattttttcgccgttcttatac 2769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ctcggcgacgtctcgtctgtttgtgaagccgtaggccttattttttcgccgttcttatac 359
Query: 2770 -aaattgaaattatttgaattatgattcaaagtttgttctattttattataaatataaga 2828
||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 360 aaaatttaaattatttgaattatgattcaaagtttgctctattttattataattataagt 419
Query: 2829 cgtctcggactgtactcttcttatccacaaattgcacattccaagagaatgtgactgagc 2888
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 420 cgtctcggactgtactcttcttatccacaaattgcacgttccaagagaatgtgactgagc 479
Query: 2889 tt 2890
||
Sbjct: 480 tt 481
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 297,719
Number of extensions: 6184
Number of successful extensions: 6184
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6181
Number of HSP's successfully gapped: 1
Length of query: 2890
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2873
Effective length of database: 8,119,229
Effective search space: 23326544917
Effective search space used: 23326544917
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)