BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13715 (UTR included)
(2137 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037B2D12 1219 0.0
>BF01037B2D12
Length = 746
Score = 1219 bits (615), Expect = 0.0
Identities = 624/627 (99%)
Strand = Plus / Plus
Query: 351 caggagaggcgggtcgggttcgttgtcttcgtatattatacaccagcgtggttgtgacaa 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 caggagaggcgggtcgggttcgttgtcttcgtatattatacaccagcgtggttgtgacaa 179
Query: 411 tatgacttgaatacatataccgtaacagtgaagtgtgaaatttatttgtgacgttatatt 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tatgacttgaatacatataccgtaacagtgaagtgtgaaatttatttgtgacgttatatt 239
Query: 471 gcaataagtggaaaatcttcagtaataacaatggaggctcttgaaaggaggggcaatctc 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gcaataagtggaaaatcttcagtaataacaatggaggctcttgaaaggaggggcaatctc 299
Query: 531 gccgtcatattagcgacagtctgcatcgctttgatttacaattgtgatagtgttgctgct 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gccgtcatattagcgacagtctgcatcgctttgatttacaattgtgatagtgttgctgct 359
Query: 591 aggaaccacagcatgtcgtacgtgtgtccgccccagttcatccgactcggtcacagctgt 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 aggaaccacagcatgtcgtacgtgtgtccgccccagttcatccgactcggtcacagctgt 419
Query: 651 tacttcttcagtgagaacaaagccacgtggcagtcggctcttttcttctgcaaggatcgt 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tacttcttcagtgagaacaaagccacgtggcagtcggctcttttcttctgcaaggatcgt 479
Query: 711 gatagcaacctaacagtgccagctaggtgggaggacaggaatctgagaaactacctcaat 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gatagcaacctaacagtgccagctaggtgggaggacaggaatctgagaaactacctcaat 539
Query: 771 aaaccaaacgtcgacaaagcaagtcgctggattggtggaatatatgacgcagcgtcgcgc 830
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 aaaccgaacgtcgacaaagcaagtcgctggattggtggaatatatgacgcagcgtcgcgc 599
Query: 831 tcctggaaatggggaggtgaacttcgaccgatgcattatcagtcgttctccaagatgaag 890
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 600 tcctggaaatggggaggtgaacttcgaccgatgcattatcagtcgttttccaagatgaag 659
Query: 891 aagctgacccccgagcaattgcagttccattgcattgctatgatacccgagcttctctac 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 aagctgacccccgagcaattgcagttccattgcattgctatgatacccgagcttctctac 719
Query: 951 agatgggcaccaagaagctgtttcgag 977
|||||||| ||||||||||||||||||
Sbjct: 720 agatgggcgccaagaagctgtttcgag 746
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 206,657
Number of extensions: 3667
Number of successful extensions: 3667
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3667
Number of HSP's successfully gapped: 1
Length of query: 2137
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2120
Effective length of database: 8,119,229
Effective search space: 17212765480
Effective search space used: 17212765480
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)