BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13718 (UTR included)
(3769 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01012A1E04 1001 0.0
BF01060B1D11 242 3e-63
BF01047B2H03 184 7e-46
BF01056B1D01 70 3e-11
>BF01012A1E04
Length = 841
Score = 1001 bits (505), Expect = 0.0
Identities = 527/533 (98%), Gaps = 1/533 (0%)
Strand = Plus / Minus
Query: 1863 gcggatcccaacgaacaaaaacctggaattcctcgtttcgatttccacggcattccacca 1922
|||||||||||||| |||||||||||||| ||||||||||||||||||||||| || |||
Sbjct: 541 gcggatcccaacgatcaaaaacctggaatacctcgtttcgatttccacggcatccctcca 482
Query: 1923 acgctagatgagataagtattcagataaagaaaaaatcgtctaaatctgcgccgggaccc 1982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acgctagatgagataagtattcagataaagaaaaaatcgtctaaatctgcgccgggaccc 422
Query: 1983 gatggtatcccatatatagtctttaaaaaa-tgtccatcggttcgtaaacatctcacata 2041
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 421 gatggtatcccatatatagtctttaaaaaaatgtccatcggttcgtaaacatctcacata 362
Query: 2042 tatatacgataaaatctggtcaaggaagcaaatcccggagtgcttcgggaaagcaatttt 2101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tatatacgataaaatctggtcaaggaagcaaatcccggagtgcttcgggaaagcaatttt 302
Query: 2102 tgtcctcattcccaaaaaagatcgagtcacagatccgaaagatactagaccgatagcctt 2161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtcctcattcccaaaaaagatcgagtcacagatccgaaagatactagaccgatagcctt 242
Query: 2162 aacaaatactatatccaaaatctttttctcagttctacaaacgagaatgacgcgattcat 2221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacaaatactatatccaaaatctttttctcagttctacaaacgagaatgacgcgattcat 182
Query: 2222 gctcagcaacaggtattttaggccaaatcaccagaaagggtttttacccggaatttctgg 2281
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gctcagcaacaggtattttaggccaaatcaccagaaagggtttttacccggaatttctgt 122
Query: 2282 atgcctagaacacaacactttgctgtcggagagtttaaaagatgctaggaaaagcgagag 2341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgcctagaacacaacactttgctgtcggagagtttaaaagatgctaggaaaagcgagag 62
Query: 2342 gcaaattacagtttgttggatagacttagagaacgcgttcgggtcgatacaac 2394
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcaaattacagtttgttggatagacttagagaacgcgttcgggtcgatacaac 9
>BF01060B1D11
Length = 799
Score = 242 bits (122), Expect = 3e-63
Identities = 333/401 (83%), Gaps = 18/401 (4%)
Strand = Plus / Minus
Query: 3068 ctatgattttaataaaacccttttgtcaaagttagatgcaggcttcataaagatgttgaa 3127
|||||||||||||||||||||||| || | ||| || | |||||||||| |||||||
Sbjct: 711 ctatgattttaataaaacccttttatctgaattaagtgtcg-cttcataaag-tgttgaa 654
Query: 3128 gttgtggctcgggctcgcgccaacggctgattcatcggcttcatttagggatcgcaatag 3187
||||||||| |||||||| || || ||||| | ||||||| | ||||||||||||||||
Sbjct: 653 tttgtggctccggctcgcgacatcgactgatacgtcggctttaattagggatcgcaatag 594
Query: 3188 ttttgggatgagtctaaaaaggccatcggagctctataaacacct--gagtttccaagag 3245
||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 593 ttttgggatgagtctaaaaaggccatcggagctctataaacacttaagagtttccaagag 534
Query: 3246 atacatcctggggaaatcccatgatgacgtcgttacatcgcttccaaacgacaaagatgc 3305
| | |||| ||||||| ||||| |||| ||| ||||||| || ||||| | |||||
Sbjct: 533 acatatcccggggaaagcccataatgatgtcattacatcactcccaaaaaccggagatgg 474
Query: 3306 cccaga-------------gcttcaattccacaagcagtttatgataggagcacaatata 3352
|||||| |||||||||||||| ||||||||||||||||||||| ||
Sbjct: 473 cccagaactaaagtctgagacttcaattccacaaacagtttatgataggagcacaaagta 414
Query: 3353 ac-agagtagggttgggatcaagtaagaaggtccaagatacggatatattgaagtctttt 3411
|| |||||||| || |||||||| ||||||| ||||||| |||||||||||||| ||||
Sbjct: 413 acgagagtaggattaggatcaaggaagaaggctcaagatatggatatattgaagtatttt 354
Query: 3412 attcgacaagacgagagtgataaatatgagatccatgcaat 3452
|||| |||||||||| |||| |||| |||||||||||||
Sbjct: 353 attcagcaagacgagaatgatggatataagatccatgcaat 313
Score = 85.7 bits (43), Expect = 5e-16
Identities = 83/96 (86%), Gaps = 4/96 (4%)
Strand = Plus / Minus
Query: 3574 tcccagatcagagtaatttagtaaga----tggggtaaaggtaccgaaaagacttgctat 3629
|||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||
Sbjct: 234 tcccagatcagagtaatttagtaagacgggaggggtaaagataccgaaaaaacttgctat 175
Query: 3630 atctgtgggagggcagttggaactgctacgcatttg 3665
|| || | || ||||||||||| ||||| |||||||
Sbjct: 174 atttgcgagaaggcagttggaattgctaagcatttg 139
>BF01047B2H03
Length = 758
Score = 184 bits (93), Expect = 7e-46
Identities = 243/293 (82%), Gaps = 15/293 (5%)
Strand = Plus / Minus
Query: 3194 gatgagtctaaaaaggccatcggagctctataaacacct--gagtttccaagagatacat 3251
||||||||||||||||||||||||||||||||||||| | |||||||||||||| | ||
Sbjct: 758 gatgagtctaaaaaggccatcggagctctataaacacttaagagtttccaagagacatat 699
Query: 3252 cctggggaaatcccatgatgacgtcgttacatcgcttccaaacgacaaagatgccccaga 3311
|| ||||||| ||||| |||| ||| ||||||| || |||| | | ||||||||| ||
Sbjct: 698 cccggggaaagcccataatgatgtcattacatcactctcaaaaaatagagatgcccctga 639
Query: 3312 gct------------tcaattccacaagcagtttatgataggagcacaatataac-agag 3358
|| ||||||||| || ||||||||||||||||||||| |||| ||||
Sbjct: 638 actaaagtcaagacttcaattccataaacagtttatgataggagcacaaagtaacgagag 579
Query: 3359 tagggttgggatcaagtaagaaggtccaagatacggatatattgaagtcttttattcgac 3418
|||| || |||||||| ||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 578 taggattaggatcaaggaagaaggcccaagatacggatatattgaagtcttttattcggc 519
Query: 3419 aagacgagagtgataaatatgagatccatgcaataagcttagaaatgcggaac 3471
||||||||| |||| |||| | ||||||||||| || ||||| |||| ||||
Sbjct: 518 aagacgagaatgatggatataacatccatgcaatgagtttagatatgcagaac 466
>BF01056B1D01
Length = 838
Score = 69.9 bits (35), Expect = 3e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 3541 taaaattctatcttaatgcggtccagatgactctcccagatcagagtaatttagtaaga 3599
||||||| |||||| ||||| |||| |||||||| ||| ||||||||||||||||||||
Sbjct: 117 taaaattttatcttgatgcgttccaaatgactcttccaaatcagagtaatttagtaaga 59
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 395,316
Number of extensions: 7465
Number of successful extensions: 7465
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 7460
Number of HSP's successfully gapped: 7
Length of query: 3769
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3751
Effective length of database: 8,109,745
Effective search space: 30419653495
Effective search space used: 30419653495
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)