BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13720 (UTR included)
(3367 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1486_C1 1459 0.0
>BF14_1486_C1
Length = 752
Score = 1459 bits (736), Expect = 0.0
Identities = 748/752 (99%)
Strand = Plus / Plus
Query: 497 gaatatggatacttctagttttgatgaatctgataatttagattcattaactggaaatgg 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaatatggatacttctagttttgatgaatctgataatttagattcattaactggaaatgg 60
Query: 557 aatcattgaaacaaacaataatagttcatcgaatagctcaagtagtagcaataatatcgt 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatcattgaaacaaacaataatagttcatcgaatagctcaagtagtagcaataatatcgt 120
Query: 617 ttataagctatttaatagggagatatatggcagtacctcaagaaaaacaaatgacaaatc 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttataagctatttaatagggagatatatggcagtacctcaagaaaaacaaatgacaaatc 180
Query: 677 tcgcaagatatttgataaaataccagcaaggcttcgcttctgtctcatggacattgtccc 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcgcaagatatttgataaaataccagcaaggcttcgcttctgtctcatggacattgtccc 240
Query: 737 tatccagtatttaagggagcatgtgtttatgggtttctcacagtgtggccagtacctgtt 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tatccagtatttaagggagcatgtgtttatgggtttctcacagtgtggccagtacctgtt 300
Query: 797 aagctttacttatagttgtaatacccaagtatattttagagaaagttccaaattcactct 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagctttacttatagttgtaatacccaagtatattttagagaaagttccaaattcactct 360
Query: 857 ccatttcctatcgtgggtgccggggagagtggttcgcccagttcacagtgtgccactatt 916
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 361 ccatttcctatcgtgggtgccggggagagtggttcgcccagttcacagtgtaccactatt 420
Query: 917 tggtgatgactgcgttgatagtaaagttaccatatccatagcgcagtggaaacacaatcc 976
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 421 tggtgatgactgcgttgatagtaaagttaccatatccatagctcaatggaaacacaaccc 480
Query: 977 aggcgtgctggttgtctatggtatatcggattcatgttcagaacgatcctacctcagtgt 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aggcgtgctggttgtctatggtatatcggattcatgttcagaacgatcctacctcagtgt 540
Query: 1037 tattggagtacctcgcttaggatgtagaaaatgttcagctatttcaagagaggaagatga 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tattggagtacctcgcttaggatgtagaaaatgttcagctatttcaagagaggaagatga 600
Query: 1097 ctcagatttaagttggagtaaacgttgtctggagcacagtttcgcgatacacactcgttt 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctcagatttaagttggagtaaacgttgtctggagcacagtttcgcgatacacactcgttt 660
Query: 1157 cttttgtacgtcggactctagcatgtacgaaccggtcgtccaattagcgtattcgaatca 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cttttgtacgtcggactctagcatgtacgaaccggtcgtccaattagcgtattcgaatca 720
Query: 1217 aattattatatacacagacttcatacacatac 1248
||||||||||||||||||||||||||||||||
Sbjct: 721 aattattatatacacagacttcatacacatac 752
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 353,121
Number of extensions: 7203
Number of successful extensions: 7203
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7203
Number of HSP's successfully gapped: 1
Length of query: 3367
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3349
Effective length of database: 8,109,745
Effective search space: 27159536005
Effective search space used: 27159536005
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)