BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13730 (UTR included)
(1885 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01014B1D02 1475 0.0
>BF01014B1D02
Length = 812
Score = 1475 bits (744), Expect = 0.0
Identities = 795/812 (97%)
Strand = Plus / Plus
Query: 410 tggttgtattttaaattattaaatcagaaaagtcacataaagttgtatattgtatcatag 469
||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 tggttgtgttttaaattcttaaatcagaaaagacacataaagttgtatattgtatcataa 60
Query: 470 atagtaatttgcaaataaaatatcagttataatggaaccaatgactttaggaagtcccac 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atagtaatttgcaaataaaatatcagttataatggaaccaatgactttaggaagtcccac 120
Query: 530 gcattctccctcgggtagtccaaacgtggggtatttacccccttttttgctaggcgagat 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcattctccctcgggtagtccaaacgtggggtatttacccccttttttgctaggcgagat 180
Query: 590 taatcctccaccaatttcaagtttatcaccaagaaccaacagtctctccccaactaaagg 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taatcctccaccaatttcaagtttatcaccaagaaccaacagtctctccccaactaaagg 240
Query: 650 gcgcagcctcgcatttggttcacccacaagtcctactcagacatctactcctgatgtgaa 709
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcgcagcctcgcatttggttcacccacaagtcctactcagacatctactcctgatgtgaa 300
Query: 710 gttgtacaggcaaaatcaatcaatgcaccagcaggctctttttaaccaacagaatttgta 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gttgtacaggcaaaatcaatcaatgcaccagcaggctctttttaaccaacagaatttgta 360
Query: 770 tcctaacttgccaaactctcctaatatctcatattccagtaaaaccaacggccctcctat 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcctaacttgccaaactctcctaatatctcatattccagtaaaaccaacggccctcctat 420
Query: 830 agaagatttatttgatacaattaagagtaatgaaccatcgataaataaatcattgtttca 889
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 421 agaagatttatttgatacaattaagagtaatgaaccatctataaataaatcactgtttca 480
Query: 890 agagaacaattttactggctatggcaataataattcaatgcttcataattcatacatgaa 949
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 481 agagaacaatttcactggctatggcaataataattcaatgcttcataactcatacatgaa 540
Query: 950 caatgtgtcactaaacaatcattccttgaccaatcagtggcaagacggttgccaggagca 1009
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caatgtgtcacttaacaatcattccttgaccaatcagtggcaagacggttgccaggagca 600
Query: 1010 agatgagtattgggtcacagtttttggcttcccaccaaatgctgcaaataccgtgttagc 1069
||||||||||||||||||||||||||| |||||||| |||||||||||||| || |||||
Sbjct: 601 agatgagtattgggtcacagtttttggtttcccaccgaatgctgcaaatactgttttagc 660
Query: 1070 taggttcagcaattgcggtgcaatgctagacaaacagtatccaacacaaggtaactgggc 1129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 taggttcagcaattgcggtgcaatgctagacaaacagtatccaacacaaggtaactgggc 720
Query: 1130 tcatatcagatacgctacgagagctgagaaagaaagagcgatggctttgaatgggagaca 1189
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 721 tcatatcagatatgctacgagagctgagaaagaaagagcaatggctttgaatgggagaca 780
Query: 1190 gattttaccgggagtaatggtgggtgtggttg 1221
||||||||||||||| ||||||||||||||||
Sbjct: 781 gattttaccgggagttatggtgggtgtggttg 812
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 260,165
Number of extensions: 5461
Number of successful extensions: 5461
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5461
Number of HSP's successfully gapped: 1
Length of query: 1885
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1868
Effective length of database: 8,119,229
Effective search space: 15166719772
Effective search space used: 15166719772
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)