BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13739 (UTR included)
(1735 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2919_C1 1479 0.0
>BF14_2919_C1
Length = 801
Score = 1479 bits (746), Expect = 0.0
Identities = 758/762 (99%)
Strand = Plus / Plus
Query: 424 cgactcgtcagcgttcccgcgtttttattttgacagtacaactttttcataagtcaataa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 cgactcgtcagcgttcccgcgtttttattttgacagtacaactttttcataagtcaataa 99
Query: 484 caaaggtttccatcgtaatgtcagcggatgtgttgagtgatgatttcaaatcccgtcttc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 caaaggtttccatcgtaatgtcagcggatgtgttgagtgatgatttcaaatcccgtcttc 159
Query: 544 atttgacgacgaagactgttggacaggagaggataaggcgagcgcttgagaacaacgagg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 atttgacgacgaagactgttggacaggagaggataaggcgagcgcttgagaacaacgagg 219
Query: 604 atgtggcgatactgtccatgttcctaccgaatgcaacagctgagagggagaataaaaaat 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 atgtggcgatactgtccatgttcctaccgaatgcaacagctgagagggagaataaaaaat 279
Query: 664 tctgttgtgtcatgaaagaccaatgcctgctcggggatcccaaaaaaactatcgcaggca 723
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 280 tctgttgtgtcatgaaagaccaatgcctgctcggggaccccaaaaaaactatcgcaggca 339
Query: 724 ccaagaagatggagtacaagactcgacagtggcatgagaagtgtttctgctgcgtggtgt 783
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 340 ccaagaagatggagtacaagacccgacagtggcacgagaagtgtttctgctgcgtggtgt 399
Query: 784 gcaagaaagccattgggaccaagagcttcatccctcgggaacaggagatctactgcactg 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gcaagaaagccattgggaccaagagcttcatccctcgggaacaggagatctactgcactg 459
Query: 844 gttgttacgagaataagttctctacgcgctgcgtcaaatgcaataagattataacgcaag 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gttgttacgagaataagttctctacgcgctgcgtcaaatgcaataagattataacgcaag 519
Query: 904 acggcgtgacgtacaagcacgagccctggcaccgcgagtgcttcacctgcacacactgca 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 acggcgtgacgtacaagcacgagccctggcaccgcgagtgcttcacctgcacacactgca 579
Query: 964 acaactcgctggccggggagcgcttcacctccagagacgagaagccatactgcagcgaat 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 acaactcgctggccggggagcgcttcacctccagagacgagaagccatactgcagcgaat 639
Query: 1024 gtttcggggaactgttcgccaagagatgcaccgcatgcagcaagcccatcaccggtatcg 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 gtttcggggaactgttcgccaagagatgcaccgcatgcagcaagcccatcaccggtatcg 699
Query: 1084 gtggcacgcgtttcatctcgttcgaggatcgtcattggcacaacaactgcttccagtgcg 1143
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 700 gtggcacgcgtttcatctcgttcgaggaccgtcattggcacaacaactgcttccagtgcg 759
Query: 1144 cttactgcaaggtgtctctcgtcgggaagggattcatcactg 1185
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 cttactgcaaggtgtctctcgtcgggaagggattcatcactg 801
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 197,505
Number of extensions: 3509
Number of successful extensions: 3509
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3509
Number of HSP's successfully gapped: 1
Length of query: 1735
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1718
Effective length of database: 8,119,229
Effective search space: 13948835422
Effective search space used: 13948835422
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)