BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13741 (UTR included)
(1761 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 454 e-127
BF14_729_C1 137 7e-32
>BF14_729_C3
Length = 2041
Score = 454 bits (229), Expect = e-127
Identities = 348/388 (89%), Gaps = 6/388 (1%)
Strand = Plus / Plus
Query: 462 ggaaacccacacatacggataggtatcttaatggaaactcacaccaccatcctatccagc 521
||||||||||||||||||| ||||| || ||||| ||||||||||||| |||||||||
Sbjct: 760 ggaaacccacacatacggacaggtacctcaatggttactcacaccaccaccctatccagt 819
Query: 522 tagctaccgttggcaaatctttgttaaagagagcccaacacctttgtgatgctgaacaac 581
|||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |
Sbjct: 820 tagctaccgttggcaaatctttgttacagagagcccaacacctttgtgatgctgaccacc 879
Query: 582 tagagaccgagctgcggcatgtaaaacatgctctcaccaccaacaacctgcccgtgcctc 641
||||| ||||||||| ||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 880 tagaggccgagctgcagcatgtaaaacatgctctcactatcaacaacctgcccgtgcctc 939
Query: 642 gccagcatcgcaagaaccacttgaagccacccatagttgagctacaatctgcaatattac 701
|||||||||||||||||||| |||||||||||| |||||| | |||| |||| ||| |||
Sbjct: 940 gccagcatcgcaagaaccacctgaagccacccacagttgaacgacaacctgcgatactac 999
Query: 702 catatgtgaagggagtt------agaataggcaacatgttgaagaagctttcgatcaaga 755
||||||||||||||||| |||||||||||||| ||||||||| |||| || || |
Sbjct: 1000 catatgtgaagggagttactgacagaataggcaacatcttgaagaaggtttccattaaaa 1059
Query: 756 ctatttacaaactatataagaaagtgagccaattcttgagaccaatcaagagtaccattc 815
|||||||||||| | |||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 1060 ctatttacaaaccacataagaaagtgagccaattcttgagaccaatcaaaagtaacattc 1119
Query: 816 ctttgcaacaagcgctcgtatacaaact 843
|||| ||||||||| |||||||||||
Sbjct: 1120 ctttacaacaagcgggtgtatacaaact 1147
Score = 109 bits (55), Expect = 2e-23
Identities = 79/87 (90%)
Strand = Plus / Plus
Query: 377 tcccccgttgtcgctgatatattcatggaggacttcgaggcgctagccctttgctcttct 436
||||||||||||||||| |||||||||||||||||||||| || ||||||||||||| ||
Sbjct: 492 tcccccgttgtcgctgaaatattcatggaggacttcgaggtgcgagccctttgctctcct 551
Query: 437 ccaataaaacctttaatatataaacgg 463
|| |||| ||||||||| | |||||||
Sbjct: 552 cctataagacctttaatttttaaacgg 578
>BF14_729_C1
Length = 981
Score = 137 bits (69), Expect = 7e-32
Identities = 90/97 (92%)
Strand = Plus / Minus
Query: 719 agaataggcaacatgttgaagaagctttcgatcaagactatttacaaactatataagaaa 778
|||||||||||||| |||||||||||||| |||||||||||| |||||| | ||||||||
Sbjct: 128 agaataggcaacattttgaagaagctttccatcaagactattcacaaaccacataagaaa 69
Query: 779 gtgagccaattcttgagaccaatcaagagtaccattc 815
|||||||||||||||||||| |||||||||| |||||
Sbjct: 68 gtgagccaattcttgagacctatcaagagtaacattc 32
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 130,977
Number of extensions: 1782
Number of successful extensions: 1782
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1782
Number of HSP's successfully gapped: 4
Length of query: 1761
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1744
Effective length of database: 8,119,229
Effective search space: 14159935376
Effective search space used: 14159935376
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)