BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13745 (UTR included)
(987 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C4 105 1e-22
BF01019A1H08 98 3e-20
BF01049B1F01 82 2e-15
BF14_335_C2 80 8e-15
BF01047B2H03 78 3e-14
>BF14_335_C4
Length = 1491
Score = 105 bits (53), Expect = 1e-22
Identities = 129/153 (84%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 497 tgagatgagcattaaacgcgcgttagataagggtcccttagagctacacctgggtcgcaa 556
|||| ||||| || || |||||| |||||| || |||||| | |||||||||||||||||
Sbjct: 1215 tgaggtgagcgtttaatgcgcgtaagataaaggccccttaaacctacacctgggtcgcaa 1274
Query: 557 gtcccaggcactattaaagctcttctccctgcaatgcgatggacccggcacgtgctcgat 616
|||||||||||| || |||||| ||| ||||||| ||||||| ||| ||| || || |
Sbjct: 1275 gtcccaggcactgttgaagctcctct-cctgcaacgcgatggtccccgcaaccgcacggt 1333
Query: 617 gaatctatggaaagcagagagttttcgtctcat 649
||||| |||||| || |||||||||||||||||
Sbjct: 1334 gaatccatggaatgctgagagttttcgtctcat 1366
>BF01019A1H08
Length = 504
Score = 97.6 bits (49), Expect = 3e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 531 cccttagagctacacctgggtcgcaagtcccaggcactattaaagctcttctccctgcaa 590
|||||| | ||||||||||||||||| ||||||||||| || |||||| |||||||||||
Sbjct: 480 cccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaa 421
Query: 591 tgcgatggacccggcac 607
||||||||||||||||
Sbjct: 420 cgcgatggacccggcac 404
>BF01049B1F01
Length = 840
Score = 81.8 bits (41), Expect = 2e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 526 agggtcccttagagctacacctgggtcgcaagtcccaggcactattaaagctcttctccc 585
|||| |||||| | ||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 653 agggccccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccc 594
Query: 586 tgcaa 590
|||||
Sbjct: 593 tgcaa 589
>BF14_335_C2
Length = 1827
Score = 79.8 bits (40), Expect = 8e-15
Identities = 91/108 (84%)
Strand = Plus / Minus
Query: 540 ctacacctgggtcgcaagtcccaggcactattaaagctcttctccctgcaatgcgatgga 599
||||||||| ||||||| ||||||||||| || |||||| ||||||||||| ||| |||
Sbjct: 915 ctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacgcggcgga 856
Query: 600 cccggcacgtgctcgatgaatctatggaaagcagagagttttcgtctc 647
|||||||| || || |||||| || |||||| |||| |||||||||
Sbjct: 855 cccggcacccgcacggtgaatccatagaaagctaagaggtttcgtctc 808
>BF01047B2H03
Length = 758
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 403 ggttttgtgagagaaggcacttgggctataaaatcaaacgtcaagcctttctctatcatt 462
|||||||||||||||| || | |||||||||| |||||| ||||||||| ||||||| ||
Sbjct: 180 ggttttgtgagagaagacattagggctataaagtcaaacatcaagccttactctatcctt 121
Query: 463 aaagcgg 469
|||||||
Sbjct: 120 aaagcgg 114
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 103,369
Number of extensions: 1764
Number of successful extensions: 1764
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1763
Number of HSP's successfully gapped: 5
Length of query: 987
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 970
Effective length of database: 8,119,229
Effective search space: 7875652130
Effective search space used: 7875652130
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)