BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13746 (UTR included)
(2167 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_547_C1 549 e-156
BF01005A1F07 127 8e-29
BF14_281_C2 111 5e-24
BF14_281_C1 107 7e-23
>BF14_547_C1
Length = 1513
Score = 549 bits (277), Expect = e-156
Identities = 289/293 (98%)
Strand = Plus / Plus
Query: 743 atttgtttacaataaacttatacctgtttataataatctccagaaggatttagatgaaga 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 atttgtttacaataaacttatacctgtttataataatctccagaaggatttagatgaaga 305
Query: 803 acacaagttcgtatttcccgaattttacggatttaataatgagttcggtaaagaaacagt 862
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 306 acacaagttcgtatttcccgaattctacggatgtaataatgagttcggtaaagaaacagt 365
Query: 863 catattagaaaatctagtagaacatggttataagtcttacagtcggtttaagtccatgga 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 catattagaaaatctagtagaacatggttataagtcttacagtcggtttaagtccatgga 425
Query: 923 ttgggatcatggcagagttggtgtggaggctttagcacggttccacgctttgtcgttcgc 982
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 426 ttgggatcatggcagagttggtgtggaggctttagcgcggttccacgctttgtcgttcgc 485
Query: 983 actgagtaaacgtgatccagaaggtttccaaaaaatagctacggacatggcgt 1035
||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 486 actgagtaaacgtgatccagaaggtttccaaaacatagctacggacatggcgt 538
Score = 327 bits (165), Expect = 4e-89
Identities = 204/217 (94%)
Strand = Plus / Plus
Query: 1266 gcagtggttgttgattaccaaaccgtctataccgggtgtcctgtggcagatctcttctac 1325
||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 772 gcagtggttgtcgattaccaaaccgtccatactgggtgtcctgtggcagatctcttctac 831
Query: 1326 atcatatttttaggttcagatgaacacttccgccgtctctattatgacaaactagtaaat 1385
| || || | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 tttattttcatgggttcagatgaacacttccgccgtctctattatgacaaactagtaaat 891
Query: 1386 cattactatacaagtctagaagaagcgctcaagaggttggctgtggatcctgtagaggtg 1445
|||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| |||
Sbjct: 892 cattactatacaagtctagaagaagcgctccagaggctggctgtggatccagtagaagtg 951
Query: 1446 tatccgagagagagctttgaaagtgatttgaaagagt 1482
|||||||||||||||||||||||||||||||||||||
Sbjct: 952 tatccgagagagagctttgaaagtgatttgaaagagt 988
>BF01005A1F07
Length = 694
Score = 127 bits (64), Expect = 8e-29
Identities = 109/124 (87%)
Strand = Plus / Plus
Query: 1358 ccgtctctattatgacaaactagtaaatcattactatacaagtctagaagaagcgctcaa 1417
|||||| |||| ||||||||||| ||||||||||||||||||||| |||| ||| |||||
Sbjct: 435 ccgtctttattttgacaaactagcaaatcattactatacaagtctcgaagcagcactcaa 494
Query: 1418 gaggttggctgtggatcctgtagaggtgtatccgagagagagctttgaaagtgatttgaa 1477
||||||| |||| ||||| ||||| |||||||| |||||| |||||||| ||||||||
Sbjct: 495 gaggttgtctgtcgatcccgtagaagtgtatccaagagagcaatttgaaagagatttgaa 554
Query: 1478 agag 1481
||||
Sbjct: 555 agag 558
>BF14_281_C2
Length = 931
Score = 111 bits (56), Expect = 5e-24
Identities = 89/100 (89%)
Strand = Plus / Plus
Query: 1358 ccgtctctattatgacaaactagtaaatcattactatacaagtctagaagaagcgctcaa 1417
|||||| |||| ||||||||||| ||||||||||||||||||||| |||| ||| |||||
Sbjct: 823 ccgtctttattttgacaaactagcaaatcattactatacaagtctcgaagcagcactcaa 882
Query: 1418 gaggttggctgtggatcctgtagaggtgtatccgagagag 1457
||||||| |||| ||||| ||||| |||||||| ||||||
Sbjct: 883 gaggttgtctgtcgatcccgtagaagtgtatccaagagag 922
>BF14_281_C1
Length = 1235
Score = 107 bits (54), Expect = 7e-23
Identities = 111/130 (85%)
Strand = Plus / Plus
Query: 1306 ctgtggcagatctcttctacatcatatttttaggttcagatgaacacttccgccgtctct 1365
||||| |||||||| | ||| |||||| | | |||||||||||| | || | |||||| |
Sbjct: 1102 ctgtgacagatctcgtgtacttcatatatcttggttcagatgaagagtttctccgtcttt 1161
Query: 1366 attatgacaaactagtaaatcattactatacaagtctagaagaagcgctcaagaggttgg 1425
||| ||||||||||| ||||||||||||||||||||| |||| ||| ||||||||||||
Sbjct: 1162 attttgacaaactagcaaatcattactatacaagtctcgaagcagcactcaagaggttgt 1221
Query: 1426 ctgtggatcc 1435
|||| |||||
Sbjct: 1222 ctgtcgatcc 1231
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 323,269
Number of extensions: 7560
Number of successful extensions: 7560
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 7559
Number of HSP's successfully gapped: 5
Length of query: 2167
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2150
Effective length of database: 8,119,229
Effective search space: 17456342350
Effective search space used: 17456342350
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)