BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13757 (UTR included)
(3148 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01016A2B02 317 6e-86
>BF01016A2B02
Length = 780
Score = 317 bits (160), Expect = 6e-86
Identities = 160/160 (100%)
Strand = Plus / Plus
Query: 1126 tcgacagcgataagaaacaaggtctccgtctaacggacaagcagcgggtatcgagctggg 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgacagcgataagaaacaaggtctccgtctaacggacaagcagcgggtatcgagctggg 60
Query: 1186 agctggtggaaggcggtcggaatcccgcgcccttgtcgtgggcctggttcgcagccacca 1245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agctggtggaaggcggtcggaatcccgcgcccttgtcgtgggcctggttcgcagccacca 120
Query: 1246 aaatagaaaggaagccgctcacatacgagaacgcgcacag 1285
||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaatagaaaggaagccgctcacatacgagaacgcgcacag 160
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 314,826
Number of extensions: 7492
Number of successful extensions: 7492
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7492
Number of HSP's successfully gapped: 1
Length of query: 3148
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3130
Effective length of database: 8,109,745
Effective search space: 25383501850
Effective search space used: 25383501850
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)