BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13768 (UTR included)
(1267 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1623_C2 872 0.0
BF14_1623_C1 500 e-141
>BF14_1623_C2
Length = 789
Score = 872 bits (440), Expect = 0.0
Identities = 440/440 (100%)
Strand = Plus / Plus
Query: 828 agaaaatttcgaaaactttgttacattcctataaactcctttaaaaatcgaacatgtttt 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agaaaatttcgaaaactttgttacattcctataaactcctttaaaaatcgaacatgtttt 61
Query: 888 ctaccgttggtagagctggtcttttggccacgagaacggtagtaaacaactctttggccg 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ctaccgttggtagagctggtcttttggccacgagaacggtagtaaacaactctttggccg 121
Query: 948 agaagacaccattggttgccggagccctagttaacaaacgtgattatgcagctaaggctg 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 agaagacaccattggttgccggagccctagttaacaaacgtgattatgcagctaaggctg 181
Query: 1008 caggaaagggttcaggtaaggtcgttgcagtcatcggtgctgttgtagacgtgcaatttg 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 caggaaagggttcaggtaaggtcgttgcagtcatcggtgctgttgtagacgtgcaatttg 241
Query: 1068 aggataatctaccccccatccttaatgctctcgaagtccaaaaccgatctccccgcctgg 1127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aggataatctaccccccatccttaatgctctcgaagtccaaaaccgatctccccgcctgg 301
Query: 1128 tcctggaggtggcccagcacttgggtgagaacaccgtccgtaccatcgctatggacggta 1187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tcctggaggtggcccagcacttgggtgagaacaccgtccgtaccatcgctatggacggta 361
Query: 1188 ccgaaggtctcgtccgtggacagcccgtcctggactccggctcacccattcgtattcctg 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ccgaaggtctcgtccgtggacagcccgtcctggactccggctcacccattcgtattcctg 421
Query: 1248 tgggagcagagaccctcggc 1267
||||||||||||||||||||
Sbjct: 422 tgggagcagagaccctcggc 441
Score = 99.6 bits (50), Expect = 1e-20
Identities = 92/106 (86%)
Strand = Plus / Plus
Query: 644 aggtaaggtggttgcagtcattggtgctgttgtggacgtacaattcgaagacaaccttcc 703
||||||||| ||||||||||| ||||||||||| ||||| ||||| || || || || ||
Sbjct: 195 aggtaaggtcgttgcagtcatcggtgctgttgtagacgtgcaatttgaggataatctacc 254
Query: 704 tcccattctaaatgccctcgaagtccaagaccgatctccccgcctg 749
||||| || ||||| |||||||||||| |||||||||||||||||
Sbjct: 255 ccccatccttaatgctctcgaagtccaaaaccgatctccccgcctg 300
>BF14_1623_C1
Length = 848
Score = 500 bits (252), Expect = e-141
Identities = 261/264 (98%)
Strand = Plus / Plus
Query: 486 ggctactttaataaaatgtttggtgctgtaagcagggtcggcagcggctttttagccgct 545
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctacttgaataaaatgtttggtgctgtaagcagggtcggcagcggctttttagccgct 60
Query: 546 aaaacagcagctgaaaaagtactttcagaatgtggcaaagttgcagcagttgctggaaac 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaacagcagctgaaaaagtactttcagaatgtggcaaagttgcagcagttgctggaaac 120
Query: 606 aagagggattacgcagctaaggcctctggaaaagggcaaggtaaggtggttgcagtcatt 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagagggattacgcagctaaggcctctggaaaagggcaaggtaaggtggttgcagtcatt 180
Query: 666 ggtgctgttgtggacgtacaattcgaagacaaccttcctcccattctaaatgccctcgaa 725
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 181 ggtgctgttgtggacgtacaatttgaagacaatcttcctcccattctaaatgccctcgaa 240
Query: 726 gtccaagaccgatctccccgcctg 749
||||||||||||||||||||||||
Sbjct: 241 gtccaagaccgatctccccgcctg 264
Score = 394 bits (199), Expect = e-109
Identities = 235/247 (95%)
Strand = Plus / Plus
Query: 1021 aggtaaggtcgttgcagtcatcggtgctgttgtagacgtgcaatttgaggataatctacc 1080
||||||||| ||||||||||| ||||||||||| ||||| |||||||| || ||||| ||
Sbjct: 159 aggtaaggtggttgcagtcattggtgctgttgtggacgtacaatttgaagacaatcttcc 218
Query: 1081 ccccatccttaatgctctcgaagtccaaaaccgatctccccgcctggtcctggaggtggc 1140
||||| || ||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 219 tcccattctaaatgccctcgaagtccaagaccgatctccccgcctggtcctggaggtggc 278
Query: 1141 ccagcacttgggtgagaacaccgtccgtaccatcgctatggacggtaccgaaggtctcgt 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ccagcacttgggtgagaacaccgtccgtaccatcgctatggacggtaccgaaggtctcgt 338
Query: 1201 ccgtggacagcccgtcctggactccggctcacccattcgtattcctgtgggagcagagac 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ccgtggacagcccgtcctggactccggctcacccattcgtattcctgtgggagcagagac 398
Query: 1261 cctcggc 1267
|||||||
Sbjct: 399 cctcggc 405
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 208,466
Number of extensions: 12142
Number of successful extensions: 12142
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 12142
Number of HSP's successfully gapped: 4
Length of query: 1267
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1250
Effective length of database: 8,119,229
Effective search space: 10149036250
Effective search space used: 10149036250
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)