BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13772 (UTR included)
(1464 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01010B1E10 1003 0.0
BF01043B1E03 90 1e-17
BF01016B1E06 90 1e-17
BF01021A2B11 78 4e-14
BF14_335_C4 70 1e-11
BF14_335_C5 68 4e-11
>BF01010B1E10
Length = 769
Score = 1003 bits (506), Expect = 0.0
Identities = 532/538 (98%), Gaps = 2/538 (0%)
Strand = Plus / Plus
Query: 928 tcacatcacctacgctgcacaacaggtatttggatgaaggtgagaccctaaaactttact 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 tcacatcacctacgctgcacaacaggtatttggatgaaggtgagaccctaaaactttact 72
Query: 988 cttttaataataaggtatatatactctgaagattctagcaaacaagtaaaatagctttgg 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 cttttaataataaggtatatatactctgaagattctagcaaacaagtaaaatagctttgg 132
Query: 1048 ctaaatatagtattgactcaatatttttaatatatgatgttttcttaaaaacagtggtaa 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ctaaatatagtattgactcaatatttttaatatatgatgttttcttaaaaacagtggtaa 192
Query: 1108 tggttttactcgagtttgacaagaaacgtatagtttgctttggtatcagccatatggcaa 1167
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 193 tggttttactcgagtttgacaagaaacgtatagtatgctttggtatcagccatatggcaa 252
Query: 1168 atatt-aaaaaaaaaataagacgaagcaacactaatgaaataaaaaaaattacatttcac 1226
||||| ||||||||||||||||||||||||||||||||||| |||||| | |||||||||
Sbjct: 253 atattaaaaaaaaaaataagacgaagcaacactaatgaaat-aaaaaattaacatttcac 311
Query: 1227 tgattgataaagtgaatagtaatcgtcacgagtagttcctattatgttgctatgtaataa 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tgattgataaagtgaatagtaatcgtcacgagtagttcctattatgttgctatgtaataa 371
Query: 1287 ttactgttgttaatacacatcaagttgaattaacttattataactgtcataacgtattac 1346
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ttactattgttaatacacatcaagttgaattaacttattataactgtcataacgtattac 431
Query: 1347 gtccataacttgaaatttattaatgttttgagataacggtataatgtaggtatctatgat 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gtccataacttgaaatttattaatgttttgagataacggtataatgtaggtatctatgat 491
Query: 1407 tgttggaaaacaaagtgatttatattacggacgtcacttaataatataaaaaagcttt 1464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tgttggaaaacaaagtgatttatattacggacgtcacttaataatataaaaaagcttt 549
>BF01043B1E03
Length = 830
Score = 89.7 bits (45), Expect = 1e-17
Identities = 81/93 (87%)
Strand = Plus / Minus
Query: 1 ccaggtgtagttttaaggggcccctaactaaaacgcgttaaacgctcacctccactgtcc 60
|||||| ||| ||||| ||||||||| |||| |||||||| |||||||||||||||||
Sbjct: 411 ccaggtataggtttaaagggcccctatctaacgcgcgttaagtgctcacctccactgtcc 352
Query: 61 aagctcttctccctacctaaccatatttgaaac 93
||| || |||| ||||||||||| |||||||||
Sbjct: 351 aaggtcctctctctacctaaccaaatttgaaac 319
>BF01016B1E06
Length = 606
Score = 89.7 bits (45), Expect = 1e-17
Identities = 82/92 (89%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 1 ccaggtgtagttttaaggggcccctaactaaaacgcgttaaacgctcacctccactgtcc 60
|||||||||| |||||||||||| || |||| |||||||||||||||||||||| ||||
Sbjct: 235 ccaggtgtaggtttaaggggccc-tatctaa--cgcgttaaacgctcacctccaccgtcc 291
Query: 61 aagctcttctccctacctaaccatatttgaaa 92
|| ||| |||| ||||||||||| ||||||||
Sbjct: 292 aatctcctctctctacctaaccaaatttgaaa 323
>BF01021A2B11
Length = 729
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 1 ccaggtgtagttttaaggggcccctaactaaaacgcgttaaacgctcacctccactgtcc 60
|||||||||| || |||| ||||| | |||| ||||||||||||||||||||||| ||||
Sbjct: 444 ccaggtgtaggttgaaggcgccccgatctaacacgcgttaaacgctcacctccaccgtcc 385
Query: 61 aagctcttctc 71
|||||| ||||
Sbjct: 384 aagctcctctc 374
>BF14_335_C4
Length = 1491
Score = 69.9 bits (35), Expect = 1e-11
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 1 ccaggtgtagttttaaggggcccctaactaaaacgcgttaaacgctcacctccactgtcc 60
|||||||||| ||||||||||| || || | ||| ||||||||||||||| ||| |||
Sbjct: 1267 ccaggtgtaggtttaaggggcctttatcttacgcgcattaaacgctcacctcaactttcc 1208
Query: 61 aagctcttctccctacctaacca 83
|||||| |||| |||||||||||
Sbjct: 1207 aagctcctctctctacctaacca 1185
>BF14_335_C5
Length = 1597
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 5 gtgtagttttaaggggcccctaactaaaacgcgttaaacgctcacctccactgtccaagc 64
|||||| ||||||| |||||| |||| ||| |||||||||||||||||| ||||||||
Sbjct: 1511 gtgtaggtttaaggcgcccctgtctaacgcgcattaaacgctcacctccaccgtccaagc 1452
Query: 65 tcttctccctacct 78
|| |||| ||||||
Sbjct: 1451 tcctctctctacct 1438
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 240,774
Number of extensions: 6583
Number of successful extensions: 6583
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 6579
Number of HSP's successfully gapped: 6
Length of query: 1464
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1447
Effective length of database: 8,119,229
Effective search space: 11748524363
Effective search space used: 11748524363
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)