BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13780 (UTR included)
(1867 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_51_C1 811 0.0
BF14_51_C2 547 e-155
BF14_51_C3 264 5e-70
>BF14_51_C1
Length = 1368
Score = 811 bits (409), Expect = 0.0
Identities = 418/421 (99%)
Strand = Plus / Plus
Query: 493 aatccactatgagcggacaacagtattacccgtacaagtgcacccccaccgtgtaccccg 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 aatccactatgagcggacaacagtattacccgtacaagtgcacccccaccgtgtaccccg 127
Query: 553 cggagcctttcgagcccgcggcggatgcggaaaccctccgcaaggctatgaaaggcttcg 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 cggagcctttcgagcccgcggcggatgcggaaaccctccgcaaggctatgaaaggcttcg 187
Query: 613 gaacagacgagaaagccatcatcaacgtcctctgcagacgcggtatcgtccaacgtctgg 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 gaacagacgagaaagccatcatcaacgtcctctgcagacgcggtatcgtccaacgtctgg 247
Query: 673 aaatcgctgaaaccttcaagactaactatggaaaggacttgatcagtgaactgaaaagcg 732
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 aaattgctgaaaccttcaagactaactatggaaaggacttgatcagtgaactgaaaagcg 307
Query: 733 agctgtccggcaaccttgagaatgtgatcgtagctctcatgactcctctaccacacttct 792
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 308 agctgtccggcaaccttgagaatgtgatcgtagctctcatgacccctctaccacacttct 367
Query: 793 acgctaaagaactccacgacgctgttgcggggatcggaaccgatgaagaagccatcattg 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 acgctaaagaactccacgacgctgttgcggggatcggaaccgatgaagaagccatcattg 427
Query: 853 agatcctctgcaccttgtccaattacggcattaggactatttcggctttctatgaacaat 912
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 428 agatcctctgcaccttgtccaattacggcatcaggactatttcggctttctatgaacaat 487
Query: 913 t 913
|
Sbjct: 488 t 488
Score = 541 bits (273), Expect = e-153
Identities = 276/277 (99%)
Strand = Plus / Plus
Query: 1041 ttcgctgaatatgaagcattagcaggcaaagacatcgaggagaccatcaagaaggaattt 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttcgctgaatatgaagcattagcaggcaaagacatcgaggagaccatcaagaaggaattt 780
Query: 1101 tctggaagcgtggagaagggtatgcttgctattgtgaaatgcgtgaagagcaaagtgggc 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tctggaagcgtggagaagggtatgcttgctattgtgaaatgcgtgaagagcaaagtgggc 840
Query: 1161 ttcttcgctgagcgcttgtattactcgatgaagggaattggaaccaatgacaagactctc 1220
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ttcttcgccgagcgcttgtattactcgatgaagggaattggaaccaatgacaagactctc 900
Query: 1221 atcagaatcattgtcagtcgctccgagatcgatctcggagacatcaaacaggccttcctt 1280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 atcagaatcattgtcagtcgctccgagatcgatctcggagacatcaaacaggccttcctt 960
Query: 1281 gagaaattcggaaagcccttagaggactggatctcgg 1317
|||||||||||||||||||||||||||||||||||||
Sbjct: 961 gagaaattcggaaagcccttagaggactggatctcgg 997
Score = 182 bits (92), Expect = 1e-45
Identities = 95/96 (98%)
Strand = Plus / Plus
Query: 1316 ggacgatctagacggtgacttcaagactgtgctagtcacacttagcgcttagtcctgcaa 1375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1273 ggacgatctagacggtgacttcaagactgtgctagtcacacttagcgcttagtcctgcaa 1332
Query: 1376 aataaattatttgcaaaatgaaatttatttttttta 1411
|||||||||||||||| |||||||||||||||||||
Sbjct: 1333 aataaattatttgcaatatgaaatttatttttttta 1368
Score = 131 bits (66), Expect = 4e-30
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 203 gttagacgtgttttatttcggaaccttccttgtagtgaattgggcgtgtcgcagtctttg 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gttagacgtgttttatttcggaaccttccttgtagtgaattgggcgtgtcgcagtctttg 61
Query: 263 aaaaca 268
||||||
Sbjct: 62 aaaaca 67
>BF14_51_C2
Length = 939
Score = 547 bits (276), Expect = e-155
Identities = 279/280 (99%)
Strand = Plus / Plus
Query: 1038 attttcgctgaatatgaagcattagcaggcaaagacatcgaggagaccatcaagaaggaa 1097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 attttcgctgaatatgaagcattagcaggcaaagacatcgaggagaccatcaagaaggaa 192
Query: 1098 ttttctggaagcgtggagaagggtatgcttgctattgtgaaatgcgtgaagagcaaagtg 1157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ttttctggaagcgtggagaagggtatgcttgctattgtgaaatgcgtgaagagcaaagtg 252
Query: 1158 ggcttcttcgctgagcgcttgtattactcgatgaagggaattggaaccaatgacaagact 1217
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ggcttcttcgccgagcgcttgtattactcgatgaagggaattggaaccaatgacaagact 312
Query: 1218 ctcatcagaatcattgtcagtcgctccgagatcgatctcggagacatcaaacaggccttc 1277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ctcatcagaatcattgtcagtcgctccgagatcgatctcggagacatcaaacaggccttc 372
Query: 1278 cttgagaaattcggaaagcccttagaggactggatctcgg 1317
||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cttgagaaattcggaaagcccttagaggactggatctcgg 412
>BF14_51_C3
Length = 1239
Score = 264 bits (133), Expect = 5e-70
Identities = 143/145 (98%), Gaps = 1/145 (0%)
Strand = Plus / Plus
Query: 1316 ggacgatctagacggtgacttcaagactgtgctagtcacacttagcgcttagtcctgcaa 1375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 ggacgatctagacggtgacttcaagactgtgctagtcacacttagcgcttagtcctgcaa 1154
Query: 1376 aataaattatttgcaaaatgaaatttattttttt-taaaagatatttttaagcaatgcat 1434
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1155 aataaattatttgcaaaatgaaatttatttttttaaaaaagatatttttaagcaatgcat 1214
Query: 1435 gcatcggatgtgtagtttaatagaa 1459
|||||||||||||||||||||||||
Sbjct: 1215 gcatcggatgtgtagtttaatagaa 1239
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 263,051
Number of extensions: 6743
Number of successful extensions: 6743
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 6742
Number of HSP's successfully gapped: 6
Length of query: 1867
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1850
Effective length of database: 8,119,229
Effective search space: 15020573650
Effective search space used: 15020573650
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)