BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13803 (UTR included)
(1339 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1515_C1 662 0.0
>BF14_1515_C1
Length = 919
Score = 662 bits (334), Expect = 0.0
Identities = 361/369 (97%), Gaps = 2/369 (0%)
Strand = Plus / Plus
Query: 422 actacggtgttcagttgaattaataaataatagaatttataattattaaaaca--gaaga 479
||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||
Sbjct: 2 actacggtgttcagttgaattaataaataatagaaattataattattaaaacatagagga 61
Query: 480 aattattaattgaaacacaaaatggcagaattacttttagatccaaatattcgggtgtgg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 62 aattattaattgaaacacaaaatggcagaattacttttagatccaaatattcgtgtgtgg 121
Query: 540 gtttttttacccatagtcatcatcactttcttggttggaattgtgaggcattatgtgtcc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gtttttttacccatagtcatcatcactttcttggttggaattgtgaggcattatgtgtcc 181
Query: 600 ataatcctttcatctcaaaaaaagattgaatcattccaagtacaggacagtcaggtcatg 659
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 182 ataatcctttcatctcaaaaaaagattgagtcattccaagtacaggacagtcaggtcatg 241
Query: 660 ataagagctaggcttcttcgagagaatggtaaatatctgcccagacaatcttttaacatg 719
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 242 ataagagctaggcttcttcgagagaatggtaaatatctgcccagacaatcctttaacatg 301
Query: 720 cgcagacactggttcaataacgaggatacaggatatttcaaagtgcagaagcgggcatca 779
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 302 cgcagacactggttcaataacgaggatacaggatatttcaaagtgcagaaacgggcatca 361
Query: 780 acttcacag 788
|||||||||
Sbjct: 362 acttcacag 370
Score = 305 bits (154), Expect = 1e-82
Identities = 160/162 (98%)
Strand = Plus / Plus
Query: 1113 ccaaagtaccatttcccttgactcttcgattcaagcccatgttgcaacgtggtgttgagt 1172
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ccaaagtaccatttcccctgactcttcgattcaagcccatgttgcaacgtggtgttgagt 548
Query: 1173 tggcatatctggatgcatcctgggtttcctcggcgtcctggtacttccttaacgtgttcg 1232
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 549 tggcatatctggatgcatcctgggtttcctcggcgtcctggtacttccttaacgtgtttg 608
Query: 1233 gtttacggactatatatgcacttgtactaggagaaaacaatg 1274
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gtttacggactatatatgcacttgtactaggagaaaacaatg 650
Score = 230 bits (116), Expect = 5e-60
Identities = 119/120 (99%)
Strand = Plus / Plus
Query: 860 agaaccccatgactgatccaggtatgatgacggatatgttaaaaggcaatgtcactaatg 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 agaaccccatgactgatccaggtatgatgacggatatgttaaaaggcaatgtcactaatg 428
Query: 920 tattgccaatgatagtgataggaggctggattaattggatgtttagcggtttcttaacaa 979
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tattgccaatgatagtgattggaggctggattaattggatgtttagcggtttcttaacaa 488
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 253,698
Number of extensions: 8105
Number of successful extensions: 8105
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8104
Number of HSP's successfully gapped: 3
Length of query: 1339
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1322
Effective length of database: 8,119,229
Effective search space: 10733620738
Effective search space used: 10733620738
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)