BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13809 (UTR included)
(2290 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A2G02 1203 0.0
>BF01019A2G02
Length = 627
Score = 1203 bits (607), Expect = 0.0
Identities = 622/627 (99%)
Strand = Plus / Plus
Query: 921 gctaaaggactgacggtggacaacatcttggatatgagtgatgaggaattaggtcaactt 980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctaaaggactgacggtggacaacatcttggatatgagtgatgaggaattaggtcaactt 60
Query: 981 atttatccagtagggttttggaagactaaagtaaaatacataaagaagacaacacaaaca 1040
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 atttatcccgtagggttttggaagacaaaagtaaaatacataaagaagacaacacaaaca 120
Query: 1041 ttgaaagatcagtacgatggagacataccagactcggtggataaactctgcaagcttacc 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgaaagatcagtacgatggagacataccagactcggtggataaactctgcaagcttacc 180
Query: 1101 ggagttggacctaaaatggcacatatttgtatgaaagttgcttggaataaagtgactggc 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggagttggacctaaaatggcacatatttgtatgaaagttgcttggaataaagtgactggc 240
Query: 1161 attggtgttgacacccacgtccatagaataagcaacagaataggatgggttaaaaaatct 1220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attggtgttgacacccacgtccatagaataagcaacagaataggatgggttaaaaaatct 300
Query: 1221 acatctacaccagaagatactcgaaaagcattacaatcatggctgccatttgagctttgg 1280
||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 301 acatccacaccagaagatactcgaaaagcattagaatcatggctgccatttgagctttgg 360
Query: 1281 agtgaagtcaatcatttaatggtaggattcggtcagacgatctgtttacccatcggaccc 1340
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 361 agtgaagtcaatcatttaatggtaggatttggtcagacgatctgtttacccatcggaccc 420
Query: 1341 aactgtcaggaatgtttaaataatgatatttgtccttcaagcgagaaggataagaagtct 1400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aactgtcaggaatgtttaaataatgatatttgtccttcaagcgagaaggataagaagtct 480
Query: 1401 ccatataagaggtcaccaaagaaatcaccagcaaagattattaaaagtgaaccaatggaa 1460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccatataagaggtcaccaaagaaatcaccagcaaagattattaaaagtgaaccaatggaa 540
Query: 1461 atgggtttggataaaatcaacaatcatgaggttaaagagctaacccacacaagtttacaa 1520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atgggtttggataaaatcaacaatcatgaggttaaagagctaacccacacaagtttacaa 600
Query: 1521 gatggaaatgctgatattcttaaagtg 1547
|||||||||||||||||||||||||||
Sbjct: 601 gatggaaatgctgatattcttaaagtg 627
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 380,477
Number of extensions: 9864
Number of successful extensions: 9864
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9864
Number of HSP's successfully gapped: 1
Length of query: 2290
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2273
Effective length of database: 8,119,229
Effective search space: 18455007517
Effective search space used: 18455007517
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)