BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13810 (UTR included)
(6607 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2792_C1 1362 0.0
BF01018B2C06 1342 0.0
>BF14_2792_C1
Length = 970
Score = 1362 bits (687), Expect = 0.0
Identities = 726/740 (98%), Gaps = 5/740 (0%)
Strand = Plus / Plus
Query: 5873 attcaagctgatgaccgccaacacagtaatcagcagtgagaacgcggccttagaaacaat 5932
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5 attcaagctgatgaccgccaacacagtaatcagcagtnnnaacgcggccttagaaacaat 64
Query: 5933 gggcacagatcaattgttggatctatttcagtctcctggatcaggaccgagttcaggacc 5992
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 65 gggcacagatcaattgttggatctatttcagtctcctggatcaggaccgagctcaggacc 124
Query: 5993 aacgggagcgcagtgttctaaatccctcatagagaacctccccgacctctgggatgacaa 6052
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 125 aacgggagcgcagtgttctaaatccctcatagagaacctccccgacctctgggacgacaa 184
Query: 6053 actgtatgaagaagagtatgatatgaccaactttattaagagcctaaagaaataaaatag 6112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 actgtatgaagaagagtatgatatgaccaactttattaagagcctaaagaaataaaatag 244
Query: 6113 ttatcttttgacaattactcataaggcttttttatttattgcttaaaaaccgaaattgta 6172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ttatcttttgacaattactcataaggcttttttatttattgcttaaaaaccgaaattgta 304
Query: 6173 aatttatattatctaacaatgtcattaaataagcagtccgttgaatgttatacatataaa 6232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aatttatattatctaacaatgtcattaaataagcagtccgttgaatgttatacatataaa 364
Query: 6233 ttagttgataatatttgatagtgactgtaaaatgtattatcatatgggtatacaacagag 6292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttagttgataatatttgatagtgactgtaaaatgtattatcatatgggtatacaacagag 424
Query: 6293 gcttgtgctgttcatagaaaaggattcttaaaatataatctgtaattattctttgaaagt 6352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gcttgtgctgttcatagaaaaggattcttaaaatataatctgtaattattctttgaaagt 484
Query: 6353 ataaatatcacaatttaggataataaatactgtcaattaagtagaaaatcaatgttctgt 6412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ataaatatcacaatttaggataataaatactgtcaattaagtagaaaatcaatgttctgt 544
Query: 6413 acctcaatataggagctataatgatgtctatacaataaaaataacttaattcgaagacaa 6472
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 545 acctcaatataggaactataatgatgtctatacaataaaaaaaacttaattcgaagacaa 604
Query: 6473 ctgtactttgttgatatcgtgtagtttaatgaagcagtttttgtaatccccatatcttca 6532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ctgtactttgttgatatcgtgtagtttaatgaagcagtttttgtaatccccatatcttca 664
Query: 6533 tgaagaggctgtcttacc-----aatttttgtctacactgaatagatgtaaacatgttaa 6587
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 665 tgaagaggctgtcttaacaataaaatttttgtctacactgaatagatgtaaacatgttaa 724
Query: 6588 taagtaaatggtattttttt 6607
||||||||||||||| ||||
Sbjct: 725 taagtaaatggtattatttt 744
>BF01018B2C06
Length = 689
Score = 1342 bits (677), Expect = 0.0
Identities = 677/677 (100%)
Strand = Plus / Plus
Query: 4395 aagtccatcaaagattataagatacccataccggtgacggccgagctccggagctaccag 4454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 aagtccatcaaagattataagatacccataccggtgacggccgagctccggagctaccag 72
Query: 4455 caggcgggtgtgaactggcttcgcttcttgaacgagtacaagctgcacggcgtgctgtgt 4514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 caggcgggtgtgaactggcttcgcttcttgaacgagtacaagctgcacggcgtgctgtgt 132
Query: 4515 gacgacatgggtctggggaagacgctgcagtcggtggtggtggtcgcggggtcccactac 4574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gacgacatgggtctggggaagacgctgcagtcggtggtggtggtcgcggggtcccactac 192
Query: 4575 gagcgcgctcagagcggcgccccgcagatgccgtcgctggtggtgtgtccgcccacgctc 4634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gagcgcgctcagagcggcgccccgcagatgccgtcgctggtggtgtgtccgcccacgctc 252
Query: 4635 accggtcactgggtgttcgaagtgaccaagttcattccgtgtcaatacctgaagccgctt 4694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 accggtcactgggtgttcgaagtgaccaagttcattccgtgtcaatacctgaagccgctt 312
Query: 4695 ccctacgtcggtccgccggtggagcgagagaggttgagggcccaagtgccgttctacaat 4754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ccctacgtcggtccgccggtggagcgagagaggttgagggcccaagtgccgttctacaat 372
Query: 4755 ctcatagtggcttcctacgacatagtcaggaaagacatagacttcttcagcggcatcaag 4814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ctcatagtggcttcctacgacatagtcaggaaagacatagacttcttcagcggcatcaag 432
Query: 4815 tggaactactgcatcctggacgaggggcacgtcatcaagaacgggaagacgaaagccttc 4874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tggaactactgcatcctggacgaggggcacgtcatcaagaacgggaagacgaaagccttc 492
Query: 4875 aaggccatcaaacagatcgtcgccaatcacaggctgattctgtccggaacgccgatacag 4934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aaggccatcaaacagatcgtcgccaatcacaggctgattctgtccggaacgccgatacag 552
Query: 4935 aacaacgtgctcgagctgtggtctctgttcgatttcctgatgccaggtctgctggggtct 4994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 aacaacgtgctcgagctgtggtctctgttcgatttcctgatgccaggtctgctggggtct 612
Query: 4995 gagcgtcagttcacggcgcgctactcgagacccctgctggccgctcgggacccccgcgct 5054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gagcgtcagttcacggcgcgctactcgagacccctgctggccgctcgggacccccgcgct 672
Query: 5055 tcgccccatcacctgca 5071
|||||||||||||||||
Sbjct: 673 tcgccccatcacctgca 689
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 89,893
Number of extensions: 11106
Number of successful extensions: 11106
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 11105
Number of HSP's successfully gapped: 2
Length of query: 6607
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6589
Effective length of database: 8,109,745
Effective search space: 53435109805
Effective search space used: 53435109805
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)