BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13814 (UTR included)
(3532 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_617_C1 2004 0.0
BF01033A1E10 1415 0.0
>BF14_617_C1
Length = 1033
Score = 2004 bits (1011), Expect = 0.0
Identities = 1028/1033 (99%), Gaps = 3/1033 (0%)
Strand = Plus / Plus
Query: 2183 tcttttcaaagaaatatttactattctgaaaaaggcagccgaaaataaagacgatggaga 2242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcttttcaaagaaatatttactattctgaaaaaggcagccgaaaataaagacgatggaga 60
Query: 2243 acagctaccactcctagatgatacagtcagcggaaaagtaccacctgtgacgcctgccac 2302
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acagctaccactcctagacgatacagtcagcggaaaagtaccacctgtgacgcctgccac 120
Query: 2303 tgaagaaccccccggcaactttaccgatgacacccaaagtgtattgtcgtctgtgatgtc 2362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaagaaccccccggcaactttaccgatgacacccaaagtgtattgtcgtctgtgatgtc 180
Query: 2363 cgaacaatcgattccagtatctgacataactgctccagaaacaccaactctaaaggaaaa 2422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgaacaatcgattccagtatctgacataactgctccagaaacaccaactctaaaggaaaa 240
Query: 2423 ggaagagccacttccggaacctaacaaaaaacaagagaaacaaaatcacgtagaagatgt 2482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaagagccacttccggaacctaacaaaaaacaagagaaacaaaatcacgtagaagatgt 300
Query: 2483 aaaggagaacaagcccatggatgatagtaccaacggaaatcaaaaagaaactaatcaagg 2542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 301 aaaggagaacaagcccatggatgatagtaccaacggaaatcaaaaagaaactaatcaggg 360
Query: 2543 aaaagaaaaggaaaaggaaaag---aaagaaaaagaacgagtactaacaccgctggtgcg 2599
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 361 aaaagaaaaggaaaaggaaaaggagaaagaaaaagaacgagtactaacaccgctggtgcg 420
Query: 2600 tcaaccattggagtacatagcggctactagaaagaagtccagacatcgcaaccgcaagca 2659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcaaccattggagtacatagcggctactagaaagaagtccagacatcgcaaccgcaagca 480
Query: 2660 cagtcaagatcgccagggagctgactcccccgtgtttccatctccacctaaaattatata 2719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cagtcaagatcgccagggagctgactcccccgtgtttccatctccacctaaaattatata 540
Query: 2720 ccagaaatcggcaaacaagaagaggagagattacaggcccatagaaatcagcccactcgt 2779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccagaaatcggcaaacaagaagaggagagattacaggcccatagaaatcagcccactcgt 600
Query: 2780 tagaacttcagaagctgaatggaatggatctactcttcagttctacaacaaaaatataag 2839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tagaacttcagaagctgaatggaatggatctactcttcagttctacaacaaaaatataag 660
Query: 2840 ttccccaactccgagcgttagcggccggacgggaaaaatatatcaaagctggaattctga 2899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttccccaactccgagcgttagcggccggacgggaaaaatatatcaaagctggaattctga 720
Query: 2900 aactgactcttgggatataaaacaaagcactgcttctcaggagatacataagctccgaaa 2959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aactgactcttgggatataaaacaaagcactgcttctcaggagatacataagctccgaaa 780
Query: 2960 attggagctgtcctatgctgaagtattaagaaatgctgataagactaaaaataggcgcaa 3019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 attggagctgtcctatgctgaagtattaagaaatgctgataagactaaaaataggcgcaa 840
Query: 3020 gaaacatcagtaatcgaatatttttatcctacgaccccctcttgcaagagcaagagacga 3079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gaaacatcagtaatcgaatatttttatcctacgaccccctcttgcaagagcaagagacga 900
Query: 3080 gtgatcaaccgccatttgtctttgccaactggacatcgtttaattttaaaggttttgtga 3139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gtgatcaaccgccatttgtctttgccaactggacatcgtttaattttaaaggttttgtga 960
Query: 3140 tctgctagcgttacttatttttttaacacaaatcattattggttgccatatatgtaccga 3199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 tctgctagcgttacttatttttttaacacaaatcattattggttgccatatatgtaccga 1020
Query: 3200 tatgtagtatgta 3212
|||||||||||||
Sbjct: 1021 tatgtagtatgta 1033
>BF01033A1E10
Length = 762
Score = 1415 bits (714), Expect = 0.0
Identities = 729/734 (99%)
Strand = Plus / Plus
Query: 1273 caaaagaggatgaggatttgttgagattaagtgatgagttaagggaaaataaagtggcct 1332
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaaagacgatgaggatttgttgagattaagtgatgagttaagggaaaataaagtggcct 60
Query: 1333 ttgcccaagaacacaggagggtcacagagcttgaggaacagctggcatcggttatacaag 1392
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgcccaagaacacaggagggttacagagcttgaggaacagctggcatcggttatacaag 120
Query: 1393 agaacaacaggctgcaggagcagttaagaaactggaaccttaaggatgatgagcctaaat 1452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaacaacaggctgcaggagcagttaagaaactggaaccttaaggatgatgagcctaaat 180
Query: 1453 caatgcatgaagaattctcgatccttgaagaagttagacaaggacaactctgcatcaggt 1512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caatgcatgaagaattctcgatccttgaagaagttagacaaggacaactctgcatcaggt 240
Query: 1513 gtctgagaggtatggagcgggatgacatgtcgtctatcctggatggagaagacgatgata 1572
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 241 gtctgagaggtatggagcgggatgacatgtcgtctatcctggatggagaagacgatgaca 300
Query: 1573 gaagcgccatcagttcactcaatcttactcccggtcaacaaagcccaagagacgaccatg 1632
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaagcgccatcagttcactcaaccttactcccggtcaacaaagcccaagagacgaccatg 360
Query: 1633 tgtccagtaaactcgtcaagtttgataatgctaaggagaaattactccaaggtatttggg 1692
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tctccagtaaactcgtcaagtttgataatgctaaggagaaattactccaaggtatttggg 420
Query: 1693 cgaataaggaagatggccacgacaatccgtacagagacttagtacagaagtatgaggctc 1752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgaataaggaagatggccacgacaatccgtacagagacttagtacagaagtatgaggctc 480
Query: 1753 tgcttgaggtacaactatcacagggcaagaatataaagaagaaaccaaacacattgccga 1812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgcttgaggtacaactatcacagggcaagaatataaagaagaaaccaaacacattgccga 540
Query: 1813 acgcacaaactcagtctggccccgtgtctcttcaagacgaattgcaaacttcgggcgatt 1872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acgcacaaactcagtctggccccgtgtctcttcaagacgaattgcaaacttcgggcgatt 600
Query: 1873 tcagccaattcagtgttaaagataccgacgaagaaagcgggcatggtgaggaggcccaaa 1932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcagccaattcagtgttaaagataccgacgaagaaagcgggcatggtgaggaggcccaaa 660
Query: 1933 aagataatcaacaaaagaaagttgagccaacatctcgcaagaagataattcaaaccccag 1992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aagataatcaacaaaagaaagttgagccaacatctcgcaagaagataattcaaaccccag 720
Query: 1993 acttttctgaagcc 2006
||||||||||||||
Sbjct: 721 acttttctgaagcc 734
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 349,212
Number of extensions: 5839
Number of successful extensions: 5839
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5833
Number of HSP's successfully gapped: 2
Length of query: 3532
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3514
Effective length of database: 8,109,745
Effective search space: 28497643930
Effective search space used: 28497643930
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)