BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13816 (UTR included)
(1759 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030A1F02 1312 0.0
>BF01030A1F02
Length = 666
Score = 1312 bits (662), Expect = 0.0
Identities = 665/666 (99%)
Strand = Plus / Plus
Query: 480 tattagaatacttattttaaaatggcagagctgtactcttataaaaggtatgaaaaatca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tattagaatacttattttaaaatggcagagctgtactcttataaaaggtatgaaaaatca 60
Query: 540 cttggattgcttacaacgaggttcgtgtctttacttaaaaaagcaaaggatggagtttta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttggattgcttacaacgaggttcgtgtctttacttaaaaaagcaaaggatggagtttta 120
Query: 600 gatttaaaaatcgcaactgatttattggcagtaagacaaaaacggcgaatttatgatata 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatttaaaaatcgcaactgatttattggcagtaagacaaaaacggcgaatttatgatata 180
Query: 660 actaacgttctagagggaattggtttgatagaaaagcgaagtaagaatagtatacaatgg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 actaacgttctagagggaattggtttgatagaaaagcgaagtaagaatagtatacaatgg 240
Query: 720 aagggtgccagtccagatggaaatacatcagaaattggtaaaaaagtgacacttctaagg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagggtgccagtccagatggaaatacatcagaaattggtaaaaaagtgacacttctaagg 300
Query: 780 aaacaaataggtcttttggaggaacatgaagagttattagacaagcaaatgcactggatt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaacaaataggtcttttggaggaacatgaagagttattagacaagcaaatgcactggatt 360
Query: 840 gagcaaagtataaagaatgtcatagatgatgctgataatgatgctttgtcttatgtgact 899
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagcaaagtataaaaaatgtcatagatgatgctgataatgatgctttgtcttatgtgact 420
Query: 900 caaaatgatgtaaaaaactgtttccatgatagtcaagtgcttgtattggaagcaccactt 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caaaatgatgtaaaaaactgtttccatgatagtcaagtgcttgtattggaagcaccactt 480
Query: 960 ggggccaatttatcagttgggcaattagatgagggtgcaggcgaagatcagtattttcta 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggggccaatttatcagttgggcaattagatgagggtgcaggcgaagatcagtattttcta 540
Query: 1020 catttaaaatcaaatgaacctgttggtgttatacttttgtgtgatgttgaaaaggataag 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 catttaaaatcaaatgaacctgttggtgttatacttttgtgtgatgttgaaaaggataag 600
Query: 1080 attgtagatgacgatactatggatgaggaagtagaatggtatggggatagtgggactaca 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 attgtagatgacgatactatggatgaggaagtagaatggtatggggatagtgggactaca 660
Query: 1140 aattca 1145
||||||
Sbjct: 661 aattca 666
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 345,942
Number of extensions: 9450
Number of successful extensions: 9450
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9450
Number of HSP's successfully gapped: 1
Length of query: 1759
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1742
Effective length of database: 8,119,229
Effective search space: 14143696918
Effective search space used: 14143696918
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)