BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13819 (UTR included)
(4243 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01015A1A02 1328 0.0
>BF01015A1A02
Length = 710
Score = 1328 bits (670), Expect = 0.0
Identities = 670/670 (100%)
Strand = Plus / Plus
Query: 3574 ccccgactggccctggtgataaacccgcccacgataacttcgactcttatctcaccaagc 3633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccccgactggccctggtgataaacccgcccacgataacttcgactcttatctcaccaagc 60
Query: 3634 tgcagaccctatgctccccggaaggatactgccccgatgagaatcgaccgatctatgaga 3693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcagaccctatgctccccggaaggatactgccccgatgagaatcgaccgatctatgaga 120
Query: 3694 ccgttaaaaacgcgctccaagacttcacagtgctaccaacgccgatataaggctcatcca 3753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccgttaaaaacgcgctccaagacttcacagtgctaccaacgccgatataaggctcatcca 180
Query: 3754 gcgccgccgacaacgagcgacagtgattatttgccatcaccgattgcgattggcggagct 3813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcgccgccgacaacgagcgacagtgattatttgccatcaccgattgcgattggcggagct 240
Query: 3814 tatttcgactgacatataaatttaatgagtctagaacaatgtaatgttatgatatttacc 3873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tatttcgactgacatataaatttaatgagtctagaacaatgtaatgttatgatatttacc 300
Query: 3874 aaaggtgtattttaagactgttggcataaatgtcaaaacgaatacagtgaattatgaatg 3933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaaggtgtattttaagactgttggcataaatgtcaaaacgaatacagtgaattatgaatg 360
Query: 3934 tatctgtgtacagtgtgacagtgcgatggatccttcggacgttatgtgttctatttagat 3993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tatctgtgtacagtgtgacagtgcgatggatccttcggacgttatgtgttctatttagat 420
Query: 3994 acgatgtctattttataaccgttgtatacgatgtgtgaattctttaagacatcacgttac 4053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acgatgtctattttataaccgttgtatacgatgtgtgaattctttaagacatcacgttac 480
Query: 4054 cgttcgtaaattcagctagtcaataagaaggacttaaatttaaatgaaaatgaattttaa 4113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgttcgtaaattcagctagtcaataagaaggacttaaatttaaatgaaaatgaattttaa 540
Query: 4114 acattgttaatcgtatatgcttaaagtaagttaacgttagggaaagtttatacaattgta 4173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acattgttaatcgtatatgcttaaagtaagttaacgttagggaaagtttatacaattgta 600
Query: 4174 ctaagggattttagcactacactgcattcaaacgggatctaaagtgtaaatatgtacgta 4233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctaagggattttagcactacactgcattcaaacgggatctaaagtgtaaatatgtacgta 660
Query: 4234 attcattaat 4243
||||||||||
Sbjct: 661 attcattaat 670
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 344,130
Number of extensions: 5805
Number of successful extensions: 5805
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5805
Number of HSP's successfully gapped: 1
Length of query: 4243
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4225
Effective length of database: 8,109,745
Effective search space: 34263672625
Effective search space used: 34263672625
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)