BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13832 (UTR included)
(2680 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01048A2E01 1588 0.0
>BF01048A2E01
Length = 866
Score = 1588 bits (801), Expect = 0.0
Identities = 810/813 (99%)
Strand = Plus / Plus
Query: 1677 tatgtaacgagacaaggctcgcactcggacgaggcgatgtgcgattcacatatacgcggc 1736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 tatgtaacgagacaaggctcgcactcggacgaggcgatgtgcgattcacatatacgcggc 113
Query: 1737 gatgtgttcatggactcattgataactgtggctgcggcgctaccatctaatatattcgcc 1796
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 114 gatgtgttcatggactcattgataactgtggctgcggcgctaccatctaatatatttgcc 173
Query: 1797 gtgcttgggatggataaattgggaagaaaatttttcttagtgtttgcaacattctccgcg 1856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 gtgcttgggatggataaattgggaagaaaatttttcttagtgtttgcaacattctccgcg 233
Query: 1857 ggtctatgttcgggtgctatgtacttcgtgtacaacaagaccaacaacctcatagtgagc 1916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 ggtctatgttcgggtgctatgtacttcgtgtacaacaagaccaacaacctcatagtgagc 293
Query: 1917 gccgtcttcagttcagtcatttcgtgcggaaacgcctcgcttgactgtctcatcaccgaa 1976
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gctgtattcagttcagtcatttcgtgcggaaacgcctcgcttgactgtctcatcaccgaa 353
Query: 1977 gtcttcccaactaatttacgtgcgacgggcgtggcgatatctatggtggcagctcgtctg 2036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gtcttcccaactaatttacgtgcgacgggcgtggcgatatctatggtggcagctcgtctg 413
Query: 2037 ggcggtatcataggtaacgtcgtgatagcggcgttgttagactcctactgtcccgcgccc 2096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ggcggtatcataggtaacgtcgtgatagcggcgttgttagactcctactgtcccgcgccc 473
Query: 2097 accttcatagtggcagtgctcctggccgggggcggtctcatgtgtatcttcctaccgaac 2156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 accttcatagtggcagtgctcctggccgggggcggtctcatgtgtatcttcctaccgaac 533
Query: 2157 acaactagaacagctttgaaataacattcaaacatcaaacatatatgacagtttgtcaat 2216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 acaactagaacagctttgaaataacattcaaacatcaaacatatatgacagtttgtcaat 593
Query: 2217 tatatatttttaaataatcatctgtcaaaattacgtttcgtatttacagtgattcatttg 2276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tatatatttttaaataatcatctgtcaaaattacgtttcgtatttacagtgattcatttg 653
Query: 2277 ttccaaagattgttgtttataaaaaacaagttttgttactttattaaaattgatatattc 2336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 ttccaaagattgttgtttataaaaaacaagttttgttactttattaaaattgatatattc 713
Query: 2337 aagctgctaggtagataggatgttaagaattaagtgatgatcatcataagtttcaaatga 2396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 aagctgctaggtagataggatgttaagaattaagtgatgatcatcataagtttcaaatga 773
Query: 2397 tccctgatgtagatagttatcataaatttgtacaataaagtagtttataaatgaattttt 2456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 tccctgatgtagatagttatcataaatttgtacaataaagtagtttataaatgaattttt 833
Query: 2457 atttatattacaaactaacacttctgcatatca 2489
|||||||||||||||||||||||||||||||||
Sbjct: 834 atttatattacaaactaacacttctgcatatca 866
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 286,950
Number of extensions: 5602
Number of successful extensions: 5602
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5602
Number of HSP's successfully gapped: 1
Length of query: 2680
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2663
Effective length of database: 8,119,229
Effective search space: 21621506827
Effective search space used: 21621506827
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)