BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13835 (UTR included)
(1750 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01024B1G02 922 0.0
>BF01024B1G02
Length = 658
Score = 922 bits (465), Expect = 0.0
Identities = 481/486 (98%), Gaps = 4/486 (0%)
Strand = Plus / Plus
Query: 391 aaatttataaactattccattgtgagttctaataaagaataatgtacgttaacgtatatt 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 aaatttataaactattccattgtgagttctaataaagaataatgtacgttaacgtatatt 236
Query: 451 tcatatataggaagtaatgtgttctaattcttaacgcaatcttaacaaaaatggatgaag 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 tcatatataggaagtaatgtgttctaattcttaacgcaatcttaacaaaaatggatgaag 296
Query: 511 aagaagtttgggaggatttgtctaatatacctgctgatccacctgttatgagagatttgt 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 aagaagtttgggaggatttgtctaatatacctgctgatccacctgttatgagagatttgt 356
Query: 571 gtatgaaatgcaaaagaccttcagtagtgtgttggtgcaaaggtcttcccccagagaggc 630
|||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gtattaaat----aagaccttcagtagtgtgttggtgcaaaggtcttcccccagagaggc 412
Query: 631 tgattcctcaaagcactgtcattctactacaacatccaggtgaagaaaagagatgtctcc 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tgattcctcaaagcactgtcattctactacaacatccaggtgaagaaaagagatgtctcc 472
Query: 691 gtaccgctcccatgttgcaacttggtttagttgaaaataagtgtctcatctacaaaggga 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gtaccgctcccatgttgcaacttggtttagttgaaaataagtgtctcatctacaaaggga 532
Query: 751 agaaattccctcaacccagacatgagaatctagaaaacatattgactcaaccaaatacaa 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 agaaattccctcaacccagacatgagaatctagaaaacatattgactcaaccaaatacaa 592
Query: 811 tattattatatcccagtaaagctgctatagatattcaagaacttgacaaagacatgtcat 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 tattattatatcccagtaaagctgctatagatattcaagaacttgacaaagacatgtcat 652
Query: 871 cttaca 876
||||||
Sbjct: 653 cttaca 658
Score = 307 bits (155), Expect = 3e-83
Identities = 170/176 (96%)
Strand = Plus / Plus
Query: 176 ttaagaaattaacttcattctttttcttcagttgtagaattaactaattagcaaattaaa 235
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ttaagaaataaacttcattctttttcttcagttgtannnttaactaattagcaaattaaa 60
Query: 236 gcgacttatttcaatatattaatatacctttttgcaagatatattttattttcatcttaa 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcgacttatttcaatatattaatatacctttttgcaagatatattttattttcatcttaa 120
Query: 296 tagcgaacacgagtaaaattatattacaaacatataaatttataatgtgataatgg 351
||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 121 tagcgaacacgagtaaaattatattacaaacatataaatttataacatgataatgg 176
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 264,085
Number of extensions: 6329
Number of successful extensions: 6329
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6328
Number of HSP's successfully gapped: 2
Length of query: 1750
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1733
Effective length of database: 8,119,229
Effective search space: 14070623857
Effective search space used: 14070623857
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)