BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13849 (UTR included)
(2998 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025A1D04 1564 0.0
>BF01025A1D04
Length = 838
Score = 1564 bits (789), Expect = 0.0
Identities = 823/838 (98%)
Strand = Plus / Plus
Query: 412 gcaaaatgatgacatttagcaatagcaaatacattgaaaacgaatgaaaataaagaataa 471
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 gcaaaatgatgacatttagcaatagcaaatacatggaaaacgaatgaaaataaagaataa 60
Query: 472 taaagggcatacaagtgctttattttaaaatgaatatcacactaacaagcttggaagcgt 531
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaagcgcatacaagtgctttattttaaaatgaatatcacactaacaagcttggaagcgt 120
Query: 532 taatcttaaaagcaactcacgaatctctaccacaacctgatgttgctgctttggaagctt 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taatcttaaaagcaactcacgaatctctaccacaacctgatgttgctgctttggaagctt 180
Query: 592 tctatactataatgcgagagtcagcagaaggcccacaatatgccgctcaagccttagcag 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctatactataatgcgagagtcagcagaaggcccacaatatgccgctcaagccttagcag 240
Query: 652 cccgtattcactcaccaaatgctcgagaagctattttagcattatccatgttagatcgtt 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cccgtattcactcaccaaatgctcgagaagctattttagcattatccatgttagatcgtt 300
Query: 712 gtatgcgtcgtggagatgctaattttcactctgagattggcaagtttcggtttcttaatg 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtatgcgtcgtggagatgctaattttcactctgagattggcaagtttcggtttcttaatg 360
Query: 772 aaatgattaaactcgtttcacctaaacattttgcagacaaaactgcacctgaagtgagga 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaatgattaaactcgtttcacctaaacattttgcagacaaaactgcacctgaagtgagga 420
Query: 832 caatggttctccaacttatacatgcctggtcgatagaatttccaaaagaaaccaagttta 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caatggttctccaacttatacatgcctggtcgatagaatttccaaaagaaaccaagttta 480
Query: 892 aagttgcttatgacatgctcaaaaaccaaggggtcatcaaagaaacccctccaccactac 951
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 481 aagttgcttatgacatgctcaaaaaccaaggggtgatcaaagaaacccctccaccactac 540
Query: 952 ctccagaggatacaaacattcctcgcttgagagcaaagaatgctatatttgaagatgagg 1011
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctcctgaggatacaaacattcctcgcttgagagcaaagaatgctatatttgaagatgagg 600
Query: 1012 aaaaatctaagttattgcagaagttactccaaagcaaaaagccagaagacctgcagcatg 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaaaatctaagttattgcagaagttactccaaagcaaaaagccagaagacctgcagcatg 660
Query: 1072 ccaatagacttattaaaactatggttcgagaagaggagaggcggacagaagcgaatagcc 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccaatagacttattaaaactatggttcgagaagaggagaggcggacagaagcgaatagcc 720
Query: 1132 gtaaagctcaggaggttatagcggctctggatagtgcagggctactaaaagacctgctgg 1191
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtaaagctcnnnangttatagcggctctggatagtgcagggctactaaaagacctgctgg 780
Query: 1192 aacattcagcagacgcgtctgctgatgaggagcagctgattcatgaactgcatgctag 1249
|||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 781 aacattcagcnnnngcgtctgctgatgnnnagcagctgattcatgaactgcatgctag 838
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 362,860
Number of extensions: 6915
Number of successful extensions: 6915
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6914
Number of HSP's successfully gapped: 1
Length of query: 2998
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2980
Effective length of database: 8,109,745
Effective search space: 24167040100
Effective search space used: 24167040100
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)