BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13851 (UTR included)
(3160 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049A2D08 1473 0.0
>BF01049A2D08
Length = 783
Score = 1473 bits (743), Expect = 0.0
Identities = 772/783 (98%)
Strand = Plus / Plus
Query: 690 ttcttaaaaaatggcactctacataggtacggtggatttaaggaaggggaacaagagaaa 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcttaaaaaatggcactctacataggtacggtggatttaaggaaggggaacaagagaaa 60
Query: 750 gttgccaaattcttcaaaagcaactatcacaaggacatgttagaaaaggaactgtctctc 809
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61 gttgccaaattcttcaaaagcaactatcacaaggacatgttagaaaaagaactgtctctc 120
Query: 810 aaaggttggaactggggtacggctaagttcaacggagcggtcctgagttttaatgtaggc 869
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 121 aaaggttggaactggggtacggctaagttcaacggagcggtcttgagttttaatgtaggc 180
Query: 870 tcgaatactgccttcgaaatacccttacacaatgtgtcacaatgtaataccggcaagaac 929
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 181 tcgaatactgccttcgaaatacccttacacaatgtgtcacaatgtaataccggcaaaaac 240
Query: 930 gaggttacacttgaattccatcagaacgatgacacaccggtgtcattgatggagatgcgt 989
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaggttacacttgaatttcatcagaacgatgacacaccggtgtcattgatggagatgcgt 300
Query: 990 ttccacattcccacgagcgagctggcgggtgatatggacgcggtggacgccttccatcag 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttccacattcccacgagcgagctggcgggtgatatggacgcggtggacgccttccatcag 360
Query: 1050 caggtcatgaacaaggccagtgttatttccgtttccggtgacgccattgctatattcagg 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caggtcatgaacaaggccagtgttatttccgtttccggtgacgccattgctatattcagg 420
Query: 1110 gaactacagtgtctcacacctcgcggccgctacgacatcaaagtgtttcaaacgttcttc 1169
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaactacagtgtctcacacctcgtggccgctacgacatcaaagtgtttcaaacgttcttc 480
Query: 1170 caactccacggtaagactttcgattacaaaataccgatgtcgaccgtcctgcgtctcttc 1229
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 481 caactccacggtaagactttcgattacaaaatcccgatgtcgaccgttctgcgtctcttc 540
Query: 1230 ctgctgcctcataaggacacgcggcaaatgttcttcgtggtgtccctcgacccgcccatc 1289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctgctgcctcataaggacacgcggcaaatgttcttcgtggtgtccctcgacccgcccatc 600
Query: 1290 aaacagggacaaaccagataccactatctggtgttactcttcggtatcgaggaggaaacc 1349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaacagggacaaaccagataccactatctggtgttactcttcggtatcgaggaggaaacc 660
Query: 1350 agcctggaactgccattcactgaggaggatctgaaggagaaatacgaagggaagatcact 1409
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 661 agcctggaactgccattcactgaggaggatctgaaggagaaatacgnnnngaagatcact 720
Query: 1410 aaagagctatctggtccgacttatgaagtactggcaaaaattatgaaagttatcattaac 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aaagagctatctggtccgacttatgaagtactggcaaaaattatgaaagttatcattaac 780
Query: 1470 aga 1472
|||
Sbjct: 781 aga 783
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 398,772
Number of extensions: 9701
Number of successful extensions: 9701
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9701
Number of HSP's successfully gapped: 1
Length of query: 3160
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3142
Effective length of database: 8,109,745
Effective search space: 25480818790
Effective search space used: 25480818790
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)