BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13853 (UTR included)
(1948 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01045B1H07 1578 0.0
>BF01045B1H07
Length = 800
Score = 1578 bits (796), Expect = 0.0
Identities = 799/800 (99%)
Strand = Plus / Plus
Query: 310 aattgaaataatgtatttttaacttttaccaaacatttaaataaacaaaattttgatata 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aattgaaataatgtatttttaacttttaccaaacatttaaataaacaaaattttgatata 60
Query: 370 aagtgccttcaaatagattgaactcaaaatataatatttttcgtaattgcaatgttaaag 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagtgccttcaaatagattgaactcaaaatataatatttttcgtaattgcaatgttaaag 120
Query: 430 aaaacaaagattcaaattaagtaaatccattaatgttagttatagccggagtgtcgattg 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaacaaagattcaaattaagtaaatccattaatgttagttatagccggagtgtcgattg 180
Query: 490 tttttaataatatgtctggggatagcgccgtgggaagcggctctcaagtggcattggtaa 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttttaataatatgtctggggatagcgccgtgggaagcggctctcaagtggcattggtaa 240
Query: 550 ctggtggatatgaccacacgattaagctatggcaggctcacagcggcgtctgcttgcgga 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctggtggatatgaccacacgattaagctatggcaggctcacagcggcgtctgcttgcgga 300
Query: 610 ccatgcagcatccggactcgcaagtcaatgacttagaaataaatccaaacggtcaaatgg 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccatgcagcatccggactcgcaagtcaatgacttagaaataaatccaaacggtcaaatgg 360
Query: 670 tagctgcttgtggctatcaacacatcaggacctatgacctggccagcgccaatcccgatc 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tagctgcttgtggctatcaacacatcaggacctatgacctggccagcgccaatcccgatc 420
Query: 730 cagttatgaattttgaaaatataattaaaaatgtgtcaagagtaggctttcaggaaaatg 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cagttatgaattttgaaaatataattaaaaatgtgtcaagagtaggctttcaggaaaatg 480
Query: 790 gtcagtggatgtacactggcggtgaggactgcacagcaagaatatgggatttgagagtgg 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtcagtggatgtacactggcggtgaggactgcacagcaagaatatgggatttgagagtgg 540
Query: 850 gtcggccatttcaatgtcaaaggatatttgaggtccctgctccggtaaatgcagcagttc 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtcggccatttcaatgtcaaaggatatttgaggtccctgctccggtaaatgcagcagttc 600
Query: 910 ttcatccggatcaatctcagatcatggtgggtggacagaccggcatcatacacatatggg 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttcatccggatcaatctcagatcatggtgggtggacagaccggcatcatacacatatggg 660
Query: 970 acataaggactgatcatcatgaacagttgattccggaagccgaagcgagtatccaggaca 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 acataaggactgatcatcatgaacagttgattccggaagccgaagcgagtatccaggaca 720
Query: 1030 tagctatagaccctgaaggtaaactgatggctgcggtcaacaacaagggcaactgttacg 1089
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tagctatagaccctgaaggcaaactgatggctgcggtcaacaacaagggcaactgttacg 780
Query: 1090 tgtggtcgctgggcggctcg 1109
||||||||||||||||||||
Sbjct: 781 tgtggtcgctgggcggctcg 800
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 266,599
Number of extensions: 6576
Number of successful extensions: 6576
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6576
Number of HSP's successfully gapped: 1
Length of query: 1948
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1931
Effective length of database: 8,119,229
Effective search space: 15678231199
Effective search space used: 15678231199
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)