BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13869 (UTR included)
(1837 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053A1E12 712 0.0
BF01031B2B08 270 7e-72
>BF01053A1E12
Length = 772
Score = 712 bits (359), Expect = 0.0
Identities = 383/391 (97%)
Strand = Plus / Plus
Query: 377 ctgataatgataaaaaaataaatactagtatcaagtatgtaagagcggtcaaatattacc 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgataatgataaaaaaataaatactagtatcaagtatgtaagagcggtcaaatattacc 60
Query: 437 tcgacattactgataataagatttggacaaatatcttggttctcattatatattaatatt 496
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgacattactgataataagattttgacaaatatcttggttctcattatatattaatatt 120
Query: 497 taaaatgttttgcatcatccaaaaaaatatcatcaggccttcatcaattttaactcgtca 556
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 121 taaaatgttttgcatcatccaaaaaaatctcgtcaggccttcatcaattttaactcgtca 180
Query: 557 tatgcacaaccaatacgtgttaatgcaagaaaacaatggaacgcgagaaattacgctgaa 616
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 181 tatgcacaaccaatacgtgttaatgcaagaaaacaatggtacgcgagaaattacgctgaa 240
Query: 617 tcatgaaaaaacgaaaaattcactgtcactagatatgatgaacagccttatagaagcatt 676
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcacgaaaaaacgaaaaattcactgtcactagatatgatgaacagccttatagaagcatt 300
Query: 677 aaatctcaataaaggagatacctcattgcgagctattgttttatctgcaaagggtaatgt 736
||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 301 aaatctcaataaaggcgacacctcattacgagctattgttttatctgcaaagggtaatgt 360
Query: 737 tttttccgctggtcataatttaaaggaatta 767
|||||||||||||||||||||||||||||||
Sbjct: 361 tttttccgctggtcataatttaaaggaatta 391
Score = 472 bits (238), Expect = e-132
Identities = 288/310 (92%), Gaps = 21/310 (6%)
Strand = Plus / Plus
Query: 768 caaatttcatcggatttagagaaacaaaaattaatatttcaaaaagccactgaattgatg 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 caaatttcatcggatttagagaaacaaaaattaatatttcaaaaagccactgaattgatg 522
Query: 828 acttccattattcaaagtccagttccagttatagcaaaggttaatggatttgcagcagcg 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 acttccattattcaaagtccagttccagttatagcaaaggttaatggatttgcagcagcg 582
Query: 888 gctgggtgtcagttagtggctacttgcgacattataatttgctctgacaaaagcaaattt 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gctgggtgtcagttagtggctacttgcgacattataatttgctctgacaaaagcaaattt 642
Query: 948 tcaaccccagg---------------------tgctaactttggtatattctgttcaaca 986
||||||||||| |||||||||||||||||||||||| |||
Sbjct: 643 tcaaccccagggtaataggataataggacatatgctaactttggtatattctgttcgaca 702
Query: 987 ccaggaattgctatcggcagaagtgtccctaagtcgagggctatgtatatgttgttaact 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 ccaggaattgctatcggcagaagtgtccctaagtcgagggctatgtatatgttgttaact 762
Query: 1047 ggtgagccct 1056
||||||||||
Sbjct: 763 ggtgagccct 772
>BF01031B2B08
Length = 714
Score = 270 bits (136), Expect = 7e-72
Identities = 136/136 (100%)
Strand = Plus / Plus
Query: 632 aaattcactgtcactagatatgatgaacagccttatagaagcattaaatctcaataaagg 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aaattcactgtcactagatatgatgaacagccttatagaagcattaaatctcaataaagg 568
Query: 692 agatacctcattgcgagctattgttttatctgcaaagggtaatgttttttccgctggtca 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 agatacctcattgcgagctattgttttatctgcaaagggtaatgttttttccgctggtca 628
Query: 752 taatttaaaggaatta 767
||||||||||||||||
Sbjct: 629 taatttaaaggaatta 644
Score = 238 bits (120), Expect = 3e-62
Identities = 131/134 (97%), Gaps = 1/134 (0%)
Strand = Plus / Plus
Query: 386 ataaaaaaataaatactagtatcaagtatgtaagagc-ggtcaaatattacctcgacatt 444
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 6 ataaaaaaataaatactagtatcaagtatgtaagannnggtcaaatattacctcgacatt 65
Query: 445 actgataataagatttggacaaatatcttggttctcattatatattaatatttaaaatgt 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 actgataataagatttggacaaatatcttggttctcattatatattaatatttaaaatgt 125
Query: 505 tttgcatcatccaa 518
||||||||||||||
Sbjct: 126 tttgcatcatccaa 139
Score = 192 bits (97), Expect = 1e-48
Identities = 109/113 (96%)
Strand = Plus / Plus
Query: 519 aaaaatatcatcaggccttcatcaattttaactcgtcatatgcacaaccaatacgtgtta 578
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 210 aaaaatatcgtcaggccttcatcaattttaactcgtcatatgcacaaccaatacgtatta 269
Query: 579 atgcaagaaaacaatggaacgcgagaaattacgctgaatcatgaaaaaacgaa 631
||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 270 atgcaagaaaacaatggtacgcgagaaattacgctgaatcacgaaaaaacgaa 322
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 364,717
Number of extensions: 9575
Number of successful extensions: 9575
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9574
Number of HSP's successfully gapped: 6
Length of query: 1837
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1820
Effective length of database: 8,119,229
Effective search space: 14776996780
Effective search space used: 14776996780
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)