BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13874 (UTR included)
(1885 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01018A2E04 547 e-155
>BF01018A2E04
Length = 701
Score = 547 bits (276), Expect = e-155
Identities = 300/308 (97%)
Strand = Plus / Plus
Query: 724 ccgctggacactgtgtttgcagtgtatttgacgagttctacaaatcaaaacagttaacag 783
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 1 ccgctggacactgtgtttgcagtgtatttgaccatttctacaaatcaaaacagttaacag 60
Query: 784 tcgtagcaggttacactgatatatcagcatcggacaaaaatcaaaggctctccaaaatta 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgtagcaggttacactgatatatcagcatcggacaaaaatcaaaggctctccaaaatta 120
Query: 844 tacctcatccggattacagatgtaaaaaaaaaacgaacgacgtagctctccttaaaacag 903
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 121 tacctcatccggattatagatgtaaaaagaaaacgaacgacgtagctctccttaaaacag 180
Query: 904 aacaacaactggtatggacaaacgaactgcgacccgcatgtcttcctcgggctaaatcat 963
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacagcaactggtatggacaaatgaactgcgacccgcatgtcttcctcgggctaaatcat 240
Query: 964 ctgactttactggtaaaagtgccaccgttgctggttggggtttcaccaatgaagacagag 1023
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgactttactggtaaaagtgccactgttgctggttggggtttcaccaatgaagacagag 300
Query: 1024 gaattggt 1031
|||||||
Sbjct: 301 aaattggt 308
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 283,979
Number of extensions: 6114
Number of successful extensions: 6114
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6114
Number of HSP's successfully gapped: 1
Length of query: 1885
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1868
Effective length of database: 8,119,229
Effective search space: 15166719772
Effective search space used: 15166719772
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)