BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13882 (UTR included)
(1420 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2405_C1 1511 0.0
>BF14_2405_C1
Length = 908
Score = 1511 bits (762), Expect = 0.0
Identities = 811/829 (97%), Gaps = 12/829 (1%)
Strand = Plus / Plus
Query: 486 gctaacagatccaacatgacttcaacttctttcaatgtgggtttgaatgacggcgtgcgt 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 gctaacagatccaacatgacttcaacttctttcaatgtgggtttgaatgacggcgtgcgt 139
Query: 546 tcctcgagccgggtgcttcgcccccccggcggaggacacacggacatcttcggcggggag 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 tcctcgagccgggtgcttcgcccccccggcggaggacacacggacatcttcggcggggag 199
Query: 606 cccgagccgccacgcggacgccgtcccgcgcccgccctggtcgatcatatacagcatggt 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 cccgagccgccacgcggacgccgtcccgcgcccgccctggtcgatcatatacagcatggt 259
Query: 666 caaggggacgagccagccagacccactaacggggctacgaccccgaatcagaacggtcaa 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 caaggggacgagccagccagacccactaacggggctacgaccccgaatcagaacggtcaa 319
Query: 726 gcgaacgctccagtccagccttctccggtggaagcccaaccgtcgcccgtggaagctaag 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gcgaacgctccagtccagccttctccggtggaagcccaaccgtcgcccgtggaagctaag 379
Query: 786 cccgtggaagccaagcccgtggaagcggttgagaagtccgccagccccaaggccgtgact 845
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cccgtggaagccaagcccgtggaagcggttgagaagtccgccagccccaaggccgtgaca 439
Query: 846 cccactgaacccaaagtagatgccccgaaacgcgtgcgagtgccccccggcggcttctcg 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cccactgaacccaaagtagatgccccgaaacgcgtgcgagtgccccccggcggcttctcg 499
Query: 906 tccggcctgtggtaaccggccgcctctcaccctgacgtgtcggctcgtgttctggacatt 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tccggcctgtggtaaccggccgcctctcaccctgacgtgtcggctcgtgttctggacatt 559
Query: 966 aatatgttcgcagacactccgcgcccacagtgtcgtgtctcgagtacagttgcat----- 1020
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aatatgttcgcagacactccgcgcccacagtgtcgtgtctcgagtacagttgcatcctcg 619
Query: 1021 ----cctcggatccagtccgtcactctgaacgcactaacaatatatcgccactagtaact 1076
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gacccctcggatcctgtccgtcactctgaacgcactaacaatatatcgccactagtaact 679
Query: 1077 aacgtcgtcattgccgagcgccgatctcctggagctcggtgttttgtgacctgtaacgtg 1136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aacgtcgtcattgccgagcgccgatctcctggagctcggtgttttgtgacctgtaacgtg 739
Query: 1137 ccgatactgtcgggtgttgtgtgtgtacatattaatgcgtgctccgaccctagaggt--- 1193
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ccgatactgtcgggtgttgtgtgtgtacatattaatgcgtgctccgaccctagaggtctc 799
Query: 1194 ctgtcaggccgcggtccgctcggttcgttcgagtcctcgcaatactttccttactctcgt 1253
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ctgtcnnnccgcggtccgctcggttcgttcgagtcctcgcaatactttccttactctcgt 859
Query: 1254 attcctttattgactcactccgcagtcaagggttttgtttagttttatc 1302
|||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 860 attcctttattgactctctccgcagtcaagggttttgtttagttttatc 908
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 132,168
Number of extensions: 2795
Number of successful extensions: 2795
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2791
Number of HSP's successfully gapped: 2
Length of query: 1420
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1403
Effective length of database: 8,119,229
Effective search space: 11391278287
Effective search space used: 11391278287
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)