BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13888 (UTR included)
(2869 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_972_C1 716 0.0
BF01030A2F01 424 e-118
>BF14_972_C1
Length = 748
Score = 716 bits (361), Expect = 0.0
Identities = 361/361 (100%)
Strand = Plus / Plus
Query: 2509 agtccagtatctcgttatctgtcttgcatgttatcatcatatttacttgttacttatgat 2568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtccagtatctcgttatctgtcttgcatgttatcatcatatttacttgttacttatgat 60
Query: 2569 gactgattatttgaagctattgtttaaaaaattatataaattatcctcactacctcgggg 2628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gactgattatttgaagctattgtttaaaaaattatataaattatcctcactacctcgggg 120
Query: 2629 tagtcggcgcttacagcgtttccgctgatagttttgtcacagacaacacattccagattg 2688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagtcggcgcttacagcgtttccgctgatagttttgtcacagacaacacattccagattg 180
Query: 2689 tggtctgataaagtttaaggtcgattttgttcctacttgttctacaactgaggtcaatta 2748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggtctgataaagtttaaggtcgattttgttcctacttgttctacaactgaggtcaatta 240
Query: 2749 aaaagttactaaaatattctactttacatagctcactgtaatgttatattactgtggtat 2808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaaagttactaaaatattctactttacatagctcactgtaatgttatattactgtggtat 300
Query: 2809 acacatgggactacatatattgtctttagtacgtgatcgtgtctcacaagcctcttattt 2868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acacatgggactacatatattgtctttagtacgtgatcgtgtctcacaagcctcttattt 360
Query: 2869 a 2869
|
Sbjct: 361 a 361
>BF01030A2F01
Length = 717
Score = 424 bits (214), Expect = e-118
Identities = 214/214 (100%)
Strand = Plus / Plus
Query: 598 gtcaccccacgtcatgtgcgtccatggcggagatcatgtccgtgctgttcttccacacta 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtcaccccacgtcatgtgcgtccatggcggagatcatgtccgtgctgttcttccacacta 563
Query: 658 tgaggtacaaggtctccgcacccaaggacccctcggccgacagattcatactctctaagg 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgaggtacaaggtctccgcacccaaggacccctcggccgacagattcatactctctaagg 623
Query: 718 gtcacgcagcgccaatcctatacgccgcctgggcggaggccggcctgttccctctggacg 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gtcacgcagcgccaatcctatacgccgcctgggcggaggccggcctgttccctctggacg 683
Query: 778 acctgaagaacctccgcaaattgacctccgacct 811
||||||||||||||||||||||||||||||||||
Sbjct: 684 acctgaagaacctccgcaaattgacctccgacct 717
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 273,060
Number of extensions: 6007
Number of successful extensions: 6007
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6007
Number of HSP's successfully gapped: 2
Length of query: 2869
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2852
Effective length of database: 8,119,229
Effective search space: 23156041108
Effective search space used: 23156041108
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)