BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13921 (UTR included)
(1111 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056B1D02 238 2e-62
BF01023A2A12 204 2e-52
BF01052B1H02 182 8e-46
BF01037B1H08 161 3e-39
BF01010B2F09 145 2e-34
BF01031B1E12 133 7e-31
BF01029B2F12 117 4e-26
BF01040A1G09 90 9e-18
>BF01056B1D02
Length = 778
Score = 238 bits (120), Expect = 2e-62
Identities = 216/242 (89%), Gaps = 12/242 (4%)
Strand = Plus / Minus
Query: 355 gaagattagagcattaatcaccacgcttggtcaagacgggttggcgatttcaatcttata 414
|||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 688 gaaggttagagcattaaccaccacgcttgctcaagacgggttggcgatttcaatcttata 629
Query: 415 atttgaaattataagaccaagtttcctcacgatg-tttccttcaccgcttgtcagtggtg 473
||||||||||||||||||| |||||||||||| | ||||||||||| ||||||||||
Sbjct: 628 atttgaaattataagaccaggtttcctcacgacgttttccttcacc----gtcagtggtg 573
Query: 474 tctaaaaaatactcttacaaagtacatatgactcagaaaagatcacattggtacttgcca 533
||| || ||| |||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 572 tct---aactacccttagaaagtacatatgactcggaaaagatcacattggtacttgcca 516
Query: 534 ggtttcgaacccgcgtcctcacgtatgagaggcggacctttaacatccaggccacctcga 593
|||||| |||||||| ||||||| ||| ||||| |||||||| ||||||||||| |||
Sbjct: 515 ggtttc-aacccgcgccctcacg--tgatgggcgg-cctttaacctccaggccaccacga 460
Query: 594 ct 595
||
Sbjct: 459 ct 458
>BF01023A2A12
Length = 723
Score = 204 bits (103), Expect = 2e-52
Identities = 182/205 (88%), Gaps = 5/205 (2%)
Strand = Plus / Minus
Query: 354 agaagattagagcattaatcaccacgcttggtcaagacgggttggcgatttcaatcttat 413
||||| |||||||||||||||||||||| | ||||| | | |||| |||||||| |||||
Sbjct: 288 agaaggttagagcattaatcaccacgctcgctcaaggctgattggtgatttcaaacttat 229
Query: 414 aatttgaaattataagaccaagtttcctcacgatgtt-tccttcaccgcttgtcagtggt 472
|||||||||||||||||||| |||||||||||| ||| |||||||||| |||||||||
Sbjct: 228 aatttgaaattataagaccaggtttcctcacgacgttctccttcaccgtccgtcagtggt 169
Query: 473 gtctaaaaaatactcttacaaagtacatatgactcagaaaagatcacattggtacttgcc 532
|||| ||||||| ||| ||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 168 gtct---aaatactgttagaaagtacatgtgactcggaaaagatcacattggtacttgcc 112
Query: 533 aggtttcgaacccgcgtcctcacgt 557
||||||| |||||||| ||||||||
Sbjct: 111 aggtttc-aacccgcgccctcacgt 88
>BF01052B1H02
Length = 790
Score = 182 bits (92), Expect = 8e-46
Identities = 200/233 (85%), Gaps = 6/233 (2%)
Strand = Plus / Plus
Query: 360 ttagagcattaatcaccacgcttggtcaagacgggttggcgatttcaatcttataatttg 419
|||||||||||| ||||||||||| ||||||||||||||||||||||| || || ||||
Sbjct: 329 ttagagcattaagcaccacgcttgctcaagacgggttggcgatttcaaactaattatttc 388
Query: 420 aaattataagaccaagtttcctcacgatg-tttccttcaccgcttgtcagtggtgtctaa 478
|||||||||||||| |||||||||||||| |||||||||||| |||||| ||||||
Sbjct: 389 aaattataagaccaggtttcctcacgatgttttccttcaccgtccgtcagtagtgtct-- 446
Query: 479 aaaatactcttacaaagtacatatgactc--agaaaagatcacattggtacttgccaggt 536
||||||||||| ||||| ||||| | || | ||||||||||||| |||||| |||||
Sbjct: 447 -aaatactcttaaaaagtgcatatcattcgaaaaaaagatcacattagtacttcccagga 505
Query: 537 ttcgaacccgcgtcctcacgtatgagaggcggacctttaacatccaggccacc 589
|||||||| || ||||| ||| ||||||||| |||||||| || ||||||||
Sbjct: 506 ttcgaacctgcaccctcatgtacgagaggcgggcctttaacctctaggccacc 558
>BF01037B1H08
Length = 758
Score = 161 bits (81), Expect = 3e-39
Identities = 102/109 (93%)
Strand = Plus / Minus
Query: 480 aaatactcttacaaagtacatatgactcagaaaagatcacattggtacttgccaggtttc 539
||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 185 aaatattcttagaaagtacatatgactcggaaaagatcacattggtacttgccaggtttc 126
Query: 540 gaacccgcgtcctcacgtatgagaggcggacctttaacatccaggccac 588
||||||||| | ||||||||||||||||| |||||||| ||||||||||
Sbjct: 125 gaacccgcgccttcacgtatgagaggcgggcctttaacctccaggccac 77
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 352 gtagaagattagagcattaatcaccacgcttggtcaagacgggttggcgatttcaat 408
||||||| |||||||||||| ||||||||||| |||||||||| |||||||||||||
Sbjct: 294 gtagaaggttagagcattaagcaccacgcttgctcaagacggggtggcgatttcaat 238
>BF01010B2F09
Length = 764
Score = 145 bits (73), Expect = 2e-34
Identities = 198/235 (84%), Gaps = 6/235 (2%)
Strand = Plus / Plus
Query: 354 agaagattagagcattaatcaccacgcttggtcaagacgggttggcgatttcaatcttat 413
||||| |||||||||||||||||||||| | ||||||||| |||||||||| ||| ||||
Sbjct: 316 agaaggttagagcattaatcaccacgctcgctcaagacggattggcgattttaattttat 375
Query: 414 aatttgaaattataagaccaagtttcctcacgatgtttccttcaccgcttgtcagtggtg 473
||||| | ||| || ||| ||||||||| || | |||||||||| |||||||| |
Sbjct: 376 aattttta-ttacaaatccaggtttcctcat-at-tctccttcaccgtccgtcagtggcg 432
Query: 474 tctaaaaaatactcttacaaagtacatatgactcagaaaagatcacattggtacttgcca 533
|||||| |||||||| |||||||||||||||| ||||||||||||||||||| ||
Sbjct: 433 tctaaa---tactcttagaaagtacatatgactcgatgaagatcacattggtacttgtca 489
Query: 534 ggtttcgaacccgcgtcctcacgtatgagaggcggacctttaacatccaggccac 588
||||||||||||||| | |||||| |||||||| | |||||||| ||||| ||||
Sbjct: 490 ggtttcgaacccgcgacttcacgtgtgagaggctggcctttaacctccagcccac 544
>BF01031B1E12
Length = 730
Score = 133 bits (67), Expect = 7e-31
Identities = 92/99 (92%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 354 agaagattagagcattaatcaccacgcttggtcaagacgggttggcgatttcaatcttat 413
||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 162 agaaggttagagcattaatcaccacgcttgctcaagacgggttggcgatttcaatcttat 103
Query: 414 aatttg-aaattataagaccaagtttcctcacgatgttt 451
| |||| ||| ||||||||| |||||||||||||||||
Sbjct: 102 actttgctaatcataagaccaggtttcctcacgatgttt 64
>BF01029B2F12
Length = 749
Score = 117 bits (59), Expect = 4e-26
Identities = 117/133 (87%), Gaps = 5/133 (3%)
Strand = Plus / Plus
Query: 423 ttataagaccaagtttcctcacgatgt-ttccttcaccgcttgtcagtggtgtctaaaaa 481
||||||||||| |||||||| |||||| ||||||||||| ||||||||||||||||
Sbjct: 543 ttataagaccaggtttcctcgcgatgtcttccttcaccgtccgtcagtggtgtctaaa-- 600
Query: 482 atactcttacaaagtacatatgactcagaaaagatcacattggtacttgccaggtttcga 541
|||||||| |||||||||||| ||| | || |||||||||||||||||||||||||||
Sbjct: 601 -tactcttagaaagtacatatgtctctcataa-atcacattggtacttgccaggtttcga 658
Query: 542 acccgcgtcctca 554
||||||| |||||
Sbjct: 659 acccgcgccctca 671
>BF01040A1G09
Length = 753
Score = 89.7 bits (45), Expect = 9e-18
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 364 agcattaatcaccacgcttggtcaagacgggttggcgatttcaatcttataatttgaaat 423
|||||||||| ||||||||| |||||| |||||||||||||||| |||||||||||||||
Sbjct: 70 agcattaatcgccacgcttgctcaagatgggttggcgatttcaaacttataatttgaaat 11
Query: 424 t 424
|
Sbjct: 10 t 10
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 137,372
Number of extensions: 2392
Number of successful extensions: 2392
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 2378
Number of HSP's successfully gapped: 10
Length of query: 1111
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1094
Effective length of database: 8,119,229
Effective search space: 8882436526
Effective search space used: 8882436526
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)