BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13929 (UTR included)
(1588 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01012B1C01 94 8e-19
BF14_729_C2 94 8e-19
BF14_729_C3 92 3e-18
BF01058B2C06 90 1e-17
BF01019B1G10 82 3e-15
BF01012A1B09 82 3e-15
BF01012A2C11 78 5e-14
BF01035X1C09 74 8e-13
BF14_2189_C1 74 8e-13
BF01005B1E12 72 3e-12
BF01025A1D01 72 3e-12
BF01011A1H06 72 3e-12
BF01024A1H07 70 1e-11
BF01042A2B06 68 5e-11
>BF01012B1C01
Length = 950
Score = 93.7 bits (47), Expect = 8e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 1225 ctcgtctgtccgtgatcacggctgctgcaaagtaaccgaaacgtcgagagaatgtagtt 1283
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 654 ctcgtctgtccgtgatcacggctgctgcaaagtaaccgaaacgtcgggagtgtgtagtt 712
>BF14_729_C2
Length = 1289
Score = 93.7 bits (47), Expect = 8e-19
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 1224 tctcgtctgtccgtgatcacggctgctgcaaagtaaccgaaacgtcgagagaatgtagtt 1283
||||||||| |||||||||||| ||||| |||||||||||||||||| ||| ||||||||
Sbjct: 528 tctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcgggagtatgtagtt 587
Query: 1284 tttaaaaataataaa 1298
||||| || ||||||
Sbjct: 588 tttaacaaaaataaa 602
>BF14_729_C3
Length = 2041
Score = 91.7 bits (46), Expect = 3e-18
Identities = 76/85 (89%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 1225 ctcgtctgtccgtgatcacggctgctgcaaagtaaccgaaacgtcgagagaatgtagttt 1284
|||||||| |||||||||||| |||||||||||||||||||||||| || |||||||||
Sbjct: 1589 ctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcgggattatgtagttt 1648
Query: 1285 ttaaaaataataaaatttgcgtagt 1309
|| |||||||||||| |||||||
Sbjct: 1649 tt--aaataataaaatccgcgtagt 1671
>BF01058B2C06
Length = 772
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 1222 tatctcgtctgtccgtgatcacggctgctgcaaagtaaccgaaacgtcgagagaatgtag 1281
||||||||||| |||||||||||||||| |||||||||||||||||||| || ||||||
Sbjct: 484 tatctcgtctggccgtgatcacggctgcagcaaagtaaccgaaacgtcgggaatatgtag 425
Query: 1282 tttttaaaaataataaa 1298
|||| | ||| ||||||
Sbjct: 424 ttttaacaaaaaataaa 408
>BF01019B1G10
Length = 488
Score = 81.8 bits (41), Expect = 3e-15
Identities = 78/89 (87%), Gaps = 1/89 (1%)
Strand = Plus / Minus
Query: 1221 atatctcgtctgtccgtgatcacggctgctgcaaagtaaccgaaacgtcgagagaatgta 1280
||||||| |||| |||||||||||| | ||| |||| ||||||||||||| || |||||
Sbjct: 406 atatctcatctgcccgtgatcacggttactgaaaaggaaccgaaacgtcgggattatgta 347
Query: 1281 gtttttaaaaataataaaatttgcgtagt 1309
|||||| |||||||||||||| |||||||
Sbjct: 346 gttttt-aaaataataaaattcgcgtagt 319
>BF01012A1B09
Length = 841
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/76 (89%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 1234 ccgtgatcacggctgctgcaaagtaaccgaaacgtcgagagaatgtagtttttaaaaata 1293
|||||||||||||||||| |||||||||||||||||| || |||||||||| ||||||
Sbjct: 839 ccgtgatcacggctgctgaaaagtaaccgaaacgtcgggattatgtagtttt--aaaata 782
Query: 1294 ataaaatttgcgtagt 1309
||||||| |||||||
Sbjct: 781 ataaaatccgcgtagt 766
>BF01012A2C11
Length = 780
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 1235 cgtgatcacggctgctgcaaagtaaccgaaacgtcgagagaatgtagtttttaaa 1289
||||||||||| |||||||||||||||||||||||| ||| || |||||||||||
Sbjct: 293 cgtgatcacggttgctgcaaagtaaccgaaacgtcgggagcatttagtttttaaa 239
>BF01035X1C09
Length = 778
Score = 73.8 bits (37), Expect = 8e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 1223 atctcgtctgtccgtgatcacggctgctgcaaagtaaccgaaacgtcgagagaatgtagt 1282
||||||||| |||||||||||| |||||||||||||||||||||| | || ||||||||
Sbjct: 665 atctcgtcttcccgtgatcacggttgctgcaaagtaaccgaaacgttgggataatgtagt 606
Query: 1283 t 1283
|
Sbjct: 605 t 605
>BF14_2189_C1
Length = 1416
Score = 73.8 bits (37), Expect = 8e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 1226 tcgtctgtccgtgatcacggctgctgcaaagtaaccgaaacgtcg 1270
|||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 161 tcgtctgtccgtgatcacggttgctgcaaagtaacagaaacgtcg 205
>BF01005B1E12
Length = 657
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 1223 atctcgtctgtccgtgatcacggctgctgcaaagtaaccgaaac 1266
|||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 302 atctcgtctggccgtgatcacggttgctgcaaagtaaccgaaac 345
>BF01025A1D01
Length = 764
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 1223 atctcgtctgtccgtgatcacggctgctgcaaagtaaccgaaacgtcg 1270
|||||||||| |||||||||||| ||||| ||||||||||||||||||
Sbjct: 485 atctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcg 438
>BF01011A1H06
Length = 739
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 1223 atctcgtctgtccgtgatcacggctgctgcaaagtaaccgaaacgtcgagagaatgtagt 1282
|||||||||| |||||||||||| | ||| |||||||||||||||||| ||| |||||||
Sbjct: 459 atctcgtctgcccgtgatcacggttactgaaaagtaaccgaaacgtcgggagtatgtagt 518
>BF01024A1H07
Length = 726
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 1223 atctcgtctgtccgtgatcacggctgctgcaaagtaaccgaaacgtc 1269
|||||||||| |||||||||||| ||||| |||||||||||||||||
Sbjct: 646 atctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtc 692
>BF01042A2B06
Length = 781
Score = 67.9 bits (34), Expect = 5e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 1133 tgagatctaagactttgacgagtattcattcaaattaaactaatattttcggattact 1190
||||||| |||||||| ||||||||| || |||||||| ||||||||||||||||||
Sbjct: 370 tgagatcaaagactttcgcgagtattcgtttaaattaaagtaatattttcggattact 313
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 251,388
Number of extensions: 6396
Number of successful extensions: 6396
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 6393
Number of HSP's successfully gapped: 14
Length of query: 1588
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1571
Effective length of database: 8,119,229
Effective search space: 12755308759
Effective search space used: 12755308759
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)