BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13941 (UTR included)
(2292 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054B1C06 1314 0.0
>BF01054B1C06
Length = 723
Score = 1314 bits (663), Expect = 0.0
Identities = 699/711 (98%)
Strand = Plus / Plus
Query: 394 ttcttatgaccacaccatcggaaaaaacggttcgggttattatatgtacatcgagagtac 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 ttcttatgaccacaccatcggaaaaaacggttcgggttattatatgtacatcgagagtac 72
Query: 454 atcgcgtcttaagaacgacaccgccaggttcatgtcaccggtctacagccagagcctgtc 513
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 atcacgtcttaagaacgacaccgccaggttcatgtcaccggtctacagccagagcctgtc 132
Query: 514 tgaagacggctgcttctccttcttctatcacatgttcggaaacacgatcggtggtctccg 573
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tgacgacggctgcttctcattcttctatcacatgttcggaaacacgatcggtggtctccg 192
Query: 574 cgtgtaccaaaaacctgacaaacttccaatggctgttttactcaacttgagtggttccca 633
||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 193 cgtgtaccaaaaacccggcaaacttccaatggctgtcttactcaacttgagtggttccca 252
Query: 634 aagagatcagcacatcttgttcgagaagtggggcaaccaaggtgaccagtggtacagctc 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 aagagatcagcacatcttgttcgagaagtggggcaaccaaggtgaccagtggtacagctc 312
Query: 694 cgtatcagatttaaggaacctgggggataactttcagatcatcatcgaaggtatccgtgg 753
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 313 tgtatcagatttaaggaacctgggggataattttcagatcatcatcgaaggtatccgtgg 372
Query: 754 gaccagcttcaccagtgacatagccatcgacgacgtcgctatactccaaggagagaactg 813
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gaccagcttcaccagcgacatagccatcgacgacgtcgctatactccaaggagagaactg 432
Query: 814 caccgccgccaagaacagggccaccacaccatccacagcttacatgccggagtcctgtca 873
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 caccgccgccaagagcagggccaccacaccatccacagcttacatgccggagtcctgtca 492
Query: 874 gggtcgttgcatggaaccctcgaccagcttgtgtggctgcacctacagctgcctcactga 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gggtcgttgcatggaaccctcgaccagcttgtgtggctgcacctacagctgcctcactga 552
Query: 934 cgaagactgctgccacgacttcttcgagttgtgcgtctttaagcaagatttaacaaccac 993
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 cgaagactgctgtcacgacttcttcgagttgtgcgtctttaagcaagatttaacaaccac 612
Query: 994 aacagacgatatcgtggtggcgaacagttcgtatgacagacctcaaaaacagaaactgat 1053
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 cacagacgatatcgtggtggcgaacagttcgtatgacagacctcaaaaacagaaactgat 672
Query: 1054 agcatctcccccagactctactttaagtacaacgacatcgactacttctac 1104
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 agcatctcccccagactctactttaagtacaacgacatcgactacttctac 723
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 224,713
Number of extensions: 4164
Number of successful extensions: 4164
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4164
Number of HSP's successfully gapped: 1
Length of query: 2292
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2275
Effective length of database: 8,119,229
Effective search space: 18471245975
Effective search space used: 18471245975
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)