BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13959 (UTR included)
(1873 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_862_C1 942 0.0
BF01039A2C03 94 1e-18
>BF14_862_C1
Length = 990
Score = 942 bits (475), Expect = 0.0
Identities = 481/483 (99%)
Strand = Plus / Plus
Query: 647 gacgagcggttcatcaaatctatcctgggatattcacttctggctgggatcgaagacatc 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 gacgagcggttcatcaaatctatcctgggatattcacttctggctgggatcgaagacatc 212
Query: 707 tcaagatgaagcaggttcagccgcgatcttatcagttaatctggacgacgaacagttcca 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 tcaagatgaagcaggttcagccgcgatcttatcagttaatctggacgacgaacagttcca 272
Query: 767 agggaatgctgtacagcatcgcgagacccagggctatgagtccagacagttcctgagcta 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 agggaatgctgtacagcatcgcgagacccagggctatgagtccagacagttcctgagcta 332
Query: 827 ttttgaaccagctatacgttatctcgacggcggccatgcttccggtttcaaccacgtcac 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ttttgaaccagctatacgttatctcgacggcggccatgcttccggtttcaaccacgtcac 392
Query: 887 tgtgaacgctggctcagagaaaaggttattccagatcaagggcaaaagaaacgtgcgagt 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tgtgaacgctggctcagagaaaaggttattccagatcaagggcaaaagaaacgtgcgagt 452
Query: 947 acgacaggtggaggcttcggtggcatctatgaacaagggagactgcttcatcttagatgt 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 acgacaggtggaggcttcggtggcatctatgaacaagggagactgcttcatcttagatgt 512
Query: 1007 agaccaccagatactggtgtacgttggagacggttctaaaagcgtggagagaatgaaggc 1066
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 513 agaccaccagatactggtgtacgttggagacggttctaagagcgtggagagaatgaaggc 572
Query: 1067 tatcacagtcgccaaccagatacgagaccaggatcacagcggaagaggaagtatcgaaat 1126
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 573 tatcacagtcgccaaccagatacgagaccaagatcacagcggaagaggaagtatcgaaat 632
Query: 1127 cat 1129
|||
Sbjct: 633 cat 635
Score = 220 bits (111), Expect = 6e-57
Identities = 131/138 (94%), Gaps = 3/138 (2%)
Strand = Plus / Plus
Query: 1173 gagtgctacatactggacaccagctctagcatctatgtgtgggtcggaagacactccaat 1232
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 856 gagtgctacatactggacaccagctctagtatctatgtgtgggtcggaagacactccaat 915
Query: 1233 ggaagggagaaggcggaggctatgaagaaagcacatcagtatttggaggccaacaatcat 1292
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 ggaag---gaaggcggnnnctatgaagaaagcacatcagtatttggaggccaacaatcat 972
Query: 1293 ccgtcttgggttcacatc 1310
||||||||||||||||||
Sbjct: 973 ccgtcttgggttcacatc 990
>BF01039A2C03
Length = 818
Score = 93.7 bits (47), Expect = 1e-18
Identities = 98/113 (86%), Gaps = 4/113 (3%)
Strand = Plus / Plus
Query: 1740 attgtaattttgttatggcaacatttaagtatcaacttgtatttg-aagctat---tact 1795
||||||||||||| | |||||||||||||||| |||||||||||| || |||| ||||
Sbjct: 166 attgtaattttgtaagggcaacatttaagtatgaacttgtatttgaaaactataaatact 225
Query: 1796 ggcttcagccatttcgtaggacattactggaagtaacgctgaacattgaaaat 1848
| | | |||||||| |||||||||||||||||| || |||||||||| |||||
Sbjct: 226 gaccttagccattttgtaggacattactggaagaaatgctgaacattaaaaat 278
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 296,353
Number of extensions: 27297
Number of successful extensions: 27297
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 27296
Number of HSP's successfully gapped: 3
Length of query: 1873
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1856
Effective length of database: 8,119,229
Effective search space: 15069289024
Effective search space used: 15069289024
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)