BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13960 (UTR included)
(1478 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2205_C1 1134 0.0
BF01039A2C03 94 8e-19
>BF14_2205_C1
Length = 1206
Score = 1134 bits (572), Expect = 0.0
Identities = 596/604 (98%)
Strand = Plus / Plus
Query: 342 acaggtggatcctctcatctcgtcgatgaacaaaggcgacgtcttcatactcgatgtgga 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 acaggtggatcctctcatctcgtcgatgaacaaaggcgacgtcttcatactcgatgtgga 662
Query: 402 caacagcatcctggtgtacgtgggcagttcagcgaagaatgtggagaagttgaaggcgat 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 caacagcatcctggtgtacgtgggcagttcagcgaagaatgtggagaagttgaaggcgat 722
Query: 462 ttccatagccaatcagatcagagatcaggatcacaacggacgggggaaagttgatattat 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 ttccatagccaatcagatcagagatcaggatcacaacggacgggggaaagttgatattat 782
Query: 522 tgaccaatattctagtgacgtagatgtcgacaaattctttacttcgctgggttctggatc 581
||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 783 tgaccaatactctagtgacgtagatgtcgacaaattctttacttcgttgggatctggatc 842
Query: 582 caaaaatctggtgccagatgaaagtgccggtggagatgatcagacattcgagaaaaatga 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 caaaaatctggtgccagatgaaagtgccggtggagatgatcagacattcgagaaaaatga 902
Query: 642 agagcgatcagtcgttttgtcggaagtgtccgacagttctgggaaattaaaaataactcc 701
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 903 agagcggtcagtcgttttgtcagaagtgtccgacagttctgggaaattaaaaataactcc 962
Query: 702 actcacaggaccctaccgccaggaccagctgaagccacaagacacttacatacttgacac 761
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 963 actcacaggaccctaccgccaggaccagctgaagccacaagacacctacatacttgacac 1022
Query: 762 tgtcagcggctcaatctatgtgtgggttgggaaacaagcttcaccaaaggaaaaaagtga 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1023 tgtcagcggctcaatctatgtgtgggttgggaaacaagcttcaccaaaggaaaaaagtga 1082
Query: 822 agctatgtccaaggccgaacaatatttgagctcaaagaattatccgtcatgggtacacgt 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1083 agctatgtccaaggccgaacaatatttgagctcaaagaattatccgtcatgggtacatgt 1142
Query: 882 ggcgaggattccgcagggtacggaacccgctatattcaagcaatacttcactacgtggcg 941
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1143 ggcgaggattccacagggtacggaacccgctatattcaagcaatacttcactacgtggcg 1202
Query: 942 tgac 945
||||
Sbjct: 1203 tgac 1206
Score = 234 bits (118), Expect = 3e-61
Identities = 118/118 (100%)
Strand = Plus / Plus
Query: 204 gctgtacgttacctcgacggaggtcacgactccgggttcaaccacgtggtcacaaacccg 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gctgtacgttacctcgacggaggtcacgactccgggttcaaccacgtggtcacaaacccg 549
Query: 264 ggagctgagaaacgactgttccaggtcaaaggaaagaagaatattagggttagacagg 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 ggagctgagaaacgactgttccaggtcaaaggaaagaagaatattagggttagacagg 607
>BF01039A2C03
Length = 818
Score = 93.7 bits (47), Expect = 8e-19
Identities = 98/113 (86%), Gaps = 4/113 (3%)
Strand = Plus / Minus
Query: 1330 attttcaatgttcagcgttacttccagtaatgtcctacgaaatggctgaagccagta--- 1386
||||| |||||||||| || |||||||||||||||||| |||||||| | | |||||
Sbjct: 278 atttttaatgttcagcatttcttccagtaatgtcctacaaaatggctaaggtcagtattt 219
Query: 1387 atagctt-caaatacaagttgatacttaaatgttgccataacaaaattacaat 1438
|||| || |||||||||||| |||||||||||||||| | |||||||||||||
Sbjct: 218 atagttttcaaatacaagttcatacttaaatgttgcccttacaaaattacaat 166
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 164,097
Number of extensions: 3197
Number of successful extensions: 3197
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3197
Number of HSP's successfully gapped: 3
Length of query: 1478
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1461
Effective length of database: 8,119,229
Effective search space: 11862193569
Effective search space used: 11862193569
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)