BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13974 (UTR included)
(1675 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01048B1H02 1501 0.0
>BF01048B1H02
Length = 845
Score = 1501 bits (757), Expect = 0.0
Identities = 772/776 (99%), Gaps = 2/776 (0%)
Strand = Plus / Plus
Query: 900 acaattgctatgagcgatgattttcctctgagtgttgatatgctgctaaatgtgcttgaa 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 acaattgctatgagcgatgattttcctctgagtgttgatatgctgctaaatgtgcttgaa 76
Query: 960 gtcatagcaccttttaaacactttgcaaaattacgtcaatttgtagcaatgaaactgcca 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 gtcatagcaccttttaaacactttgcaaaattacgtcaatttgtagcaatgaaactgcca 136
Query: 1020 aagggttttccagtcaaaatagacatacccatcctcccaactgtaactgcaaaaattaca 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 aagggttttccagtcaaaatagacatacccatcctcccaactgtaactgcaaaaattaca 196
Query: 1080 tttcaaaaatttgaatttcgtgataatattccggatgagttgtttgtgatacctgaagac 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tttcaaaaatttgaatttcgtgataatattccggatgagttgtttgtgatacctgaagac 256
Query: 1140 tatgtagaagatccattacgtttccctgatttatgacgctttgatattctaatgctgttt 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tatgtagaagatccattacgtttccctgatttatgacgctttgatattctaatgctgttt 316
Query: 1200 caaattagtgaaagaccaatttggcaaagtgaagtgaaatgttgttgtgcatgttgcgct 1259
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 317 caaattagtgaaagaccaatttggcaaagtgaagtgaaatgtcgttgtgcatgttgcgct 376
Query: 1260 atgggtaatgagcacaccagggctagacatggtcttctcactattgagattcccatgtta 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 atgggtaatgagcacaccagggctagacatggtcttctcactattgagattcccatgtta 436
Query: 1320 tttggcctcggtagttcttattccagccactacatcatccttgtcgagtagctaaatttt 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tttggcctcggtagttcttattccagccactacatcatccttgtcgagtagctaaatttt 496
Query: 1380 agtataaatttgtaaatttaatagcatgttgttttattgtgttagagtaaagtaggtaat 1439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 agtataaatttgtaaatttaatagcatgttgttttattgtgttagagtaaagtaggtaat 556
Query: 1440 ttaaaactattagtttatttatttcttttataaagactataaaaaaattaaataacaaaa 1499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ttaaaactattagtttatttatttcttttataaagactataaaaaaattaaataacaaaa 616
Query: 1500 tgtgtggtttgtattaaattgatgtttaagtgtgtatgtatattttgtgactgtaattta 1559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tgtgtggtttgtattaaattgatgtttaagtgtgtatgtatattttgtgactgtaattta 676
Query: 1560 tgtgtgagcaaataattctgtgtatattttcatatttttctttgaaaccttccaagtaat 1619
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 677 tgtgtgagcaaataattctgtgtatattttcatatttttctttgaaaacttccaagtaat 736
Query: 1620 tttcttgattttaagtattttttttttttattatatcttaaatttactggattaaa 1675
||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 737 tttcttgattttaagta--ttttttttttattatatcttaaatttactggattaaa 790
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 236,860
Number of extensions: 17915
Number of successful extensions: 17915
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 17914
Number of HSP's successfully gapped: 1
Length of query: 1675
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1658
Effective length of database: 8,119,229
Effective search space: 13461681682
Effective search space used: 13461681682
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)